next-generation sequencing

A Deep Learning Approach for Detecting Copy Number Variation in Next-Generation Sequencing Data
Tom Hill, Robert L. Unckless

G3: Genes, Genomes, Genetics November 2019 9: 3575-3582; https://doi.org/10.1534/g3.119.400596
Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers
Cathy Boscarino, Thomas Nalpathamkalam, Giovanna Pellecchia, Weili Li, Bhooma Thiruvahindrapuram, Daniele Merico

G3: Genes, Genomes, Genetics February 2019 9: 463-471; https://doi.org/10.1534/g3.118.200516
Whole-Genome Sequencing of Suppressor DNA Mixtures Identifies Pathways That Compensate for Chromosome Segregation Defects in Schizosaccharomyces pombe
Xingya Xu, Li Wang, Mitsuhiro Yanagida

G3: Genes, Genomes, Genetics March 2018 8: 1031-1038; https://doi.org/10.1534/g3.118.200048
Multiplex shRNA Screening of Germ Cell Development by in Vivo Transfection of Mouse Testis
Nicholas R. Y. Ho, Abul R. Usmani, Yan Yin, Liang Ma, Donald F. Conrad

G3: Genes, Genomes, Genetics January 2017 7: 247-255; https://doi.org/10.1534/g3.116.036087
On Robust Association Testing for Quantitative Traits and Rare Variants
Peng Wei, Ying Cao, Yiwei Zhang, Zhiyuan Xu, Il-Youp Kwak, Eric Boerwinkle, Wei Pan

G3: Genes, Genomes, Genetics December 2016 6: 3941-3950; https://doi.org/10.1534/g3.116.035485
Whole-Genome Sequencing Reveals Genetic Variation in the Asian House Rat
Huajing Teng, Yaohua Zhang, Chengmin Shi, Fengbiao Mao, Lingling Hou, Hongling Guo, Zhongsheng Sun, Jianxu Zhang

G3: Genes, Genomes, Genetics July 2016 6: 1969-1977; https://doi.org/10.1534/g3.116.029504
Whole-Genome Sequencing Suggests Schizophrenia Risk Mechanisms in Humans with 22q11.2 Deletion Syndrome
Daniele Merico, Mehdi Zarrei, Gregory Costain, Lucas Ogura, Babak Alipanahi, Matthew J. Gazzellone, Nancy J. Butcher, Bhooma Thiruvahindrapuram, Thomas Nalpathamkalam, Eva W. C. Chow, Danielle M. Andrade, Brendan J. Frey, Christian R. Marshall, Stephen W. Scherer, Anne S. Bassett

G3: Genes, Genomes, Genetics November 2015 5: 2453-2461; https://doi.org/10.1534/g3.115.021345
Using Targeted Resequencing for Identification of Candidate Genes and SNPs for a QTL Affecting the pH Value of Chicken Meat
Xidan Li, Xiaodong Liu, Javad Nadaf, Elisabeth Le Bihan-Duval, Cécile Berri, Ian Dunn, Richard Talbot, Dirk-Jan De Koning

G3: Genes, Genomes, Genetics October 2015 5: 2085-2089; https://doi.org/10.1534/g3.115.020552
Rapid and Inexpensive Whole-Genome Genotyping-by-Sequencing for Crossover Localization and Fine-Scale Genetic Mapping
Beth A. Rowan, Vipul Patel, Detlef Weigel, Korbinian Schneeberger

G3: Genes, Genomes, Genetics March 2015 5: 385-398; https://doi.org/10.1534/g3.114.016501
A High-Density Linkage Map for Astyanax mexicanus Using Genotyping-by-Sequencing Technology
Brian M. Carlson, Samuel W. Onusko, Joshua B. Gross

G3: Genes, Genomes, Genetics February 2015 5: 241-251; https://doi.org/10.1534/g3.114.015438

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