Table 4 Gene Ontology (GO) Term enrichment of proteins that physically interact with Hrq1
GO Term (GO ID)Genes Annotated to the GO TermGO Term Usage in Gene ListGenome Frequency of Use
rRNA processing (GO:0006364)BMS1, BUD21, CBF5, CIC1, DBP10, DBP3, DBP9, DHR2, DIP2, ECM16, ENP2, ERB1, ESF1, FUN12, GAR1, KRE33, MAK5, MOT1, MPP10, MRD1, NHP2, NOP56, NOP8, NSA2, NSR1, NUG1, RLP7, ROK1, RPL1A, RPS6A, RPS8A, RRP12, RRP8, TSR1, URB1, UTP10, UTP22, UTP938 of 75 genes, 50.67%352 of 6436 annotated genes, 5.47%
ribosomal small subunit biogenesis (GO:0042274)BMS1, BUD21, DHR2, DIP2, ECM16, ENP2, FUN12, KRE33, MPP10, MRD1, NSR1, ROK1, RPS19A, RPS6A, RPS8A, RRP12, SGD1, TSR1, UTP10, UTP22, UTP921 of 75 genes, 28.00%149 of 6436 annotated genes, 2.32%
ribosomal large subunit biogenesis (GO:0042273)CIC1, DBP10, DBP3, DBP9, ERB1, MAK5, NHP2, NOC2, NOP8, NSA2, NUG1, RIX7, RLP7, RPL12A, RPL1A, RRP8, SDA1, URB118 of 75 genes, 24.00%122 of 6436 annotated genes, 1.90%
cytoplasmic translation (GO:0002181)FUN12, NIP1, RPL12A, RPL1A, RPL23A, RPL43A, RPS19A, RPS25B, RPS6A, RPS8A10 of 75 genes, 13.33%201 of 6436 annotated genes, 3.12%
transcription by RNA polymerase I (GO:0006360)CDC73, CTR9, DHR2, LEO1, MOT1, RPA49, RPB5, UTP10, UTP99 of 75 genes, 12.00%69 of 6436 annotated genes, 1.07%
transcription by RNA polymerase II (GO:0006366)CDC73, CTR9, HHF1, HTA1, LEO1, MOT1, RPB5, RTG38 of 75 genes, 10.67%536 of 6436 annotated genes, 8.33%
RNA modification (GO:0009451)AIR2, CBF5, GAR1, KRE33, NHP2, NOP56, PUS1, RRP88 of 75 genes, 10.67%177 of 6436 annotated genes, 2.75%
DNA repair (GO:0006281)CDC73, CTR9, HTA1, LEO1, PDS5, RFC36 of 75 genes, 8.00%300 of 6436 annotated genes, 4.66%
chromatin organization (GO:0006325)CTR9, FPR3, FPR4, HHF1, HTA1, LEO16 of 75 genes, 8.00%310 of 6436 annotated genes, 4.82%
peptidyl-amino acid modification (GO:0018193)CDC73, CTR9, FPR3, FPR4, HHF1, LEO16 of 75 genes, 8.00%244 of 6436 annotated genes, 3.79%