Table 5 Shoot trait-associated markers identified in the CORE panel
TraitMarkerMrgaPos (cM)Sub. effectbP-valuecMAFLiteratured
SL_5avgbs_cluster_3321.1.501169.3−2.83.75E-060.18
avgbs_cluster_19949.1.141587.2−2.54.19E-07*0.44
avgbs2_169934.1.102441.3−3.17.46E-060.12
SRGR_5GMI_ES17_c1687_437†139.3−0.0581.82E-050.15
avgbs_22768227.30.0396.43E-07*0.238
avgbs_cluster_38112.1.47355.8−0.0353.20E-060.34
avgbs_cluster_49442.1.14†377.8−0.0613.82E-060.12
GMI_ES03_c5596_2723101.60.0272.96E-060.432
avgbs_cluster_1872.1.10440.2−0.0273.43E-050.44
avgbs2_96578.1.61†978.3−0.0854.38E-060.15
avgbs_125970.1.5111420.0294.79E-060.41
avgbs_cluster_3597.1.11†1233.4−0.0623.28E-08*0.254,7
avgbs2_183559.1.251240.2−0.0473.49E-07*0.191,3,4,6
avgbs_cluster_19949.1.141587.2−0.0341.53E-07*0.44
avgbs_cluster_26077.1.2220226.6−0.0222.57E-050.44
avgbs_220709.1.572122.7−0.0421.52E-06*0.214
avgbs_310061†UKN−0.1223.36E-07*0.25
  • a : “UKN” for unmapped SNPs. b: allelic substitution effect. c:* indicated markers having P-value below Bonferroni threshold. d: 1, (Holland et al. 1997); 2, (Huang et al. 2020); 3, (Siripoonwiwat et al. 1996); 4, (Sunstrum et al. 2019); 5, (Wooten et al. 2009); 6, (Beer et al. 1997); 7, (Herrmann et al. 2014); 8, (Zimmer et al. 2018). †: associated SNPs identified on Aberdeen replicate.