Table 1 Summary of whole genome shotgun sequence data for Chelydra serpentina
PlatformSeq CenterLibrary TypeNominal insert sizeLane or CellRaw ReadsFiltered ReadsMean read lengthBases (Gb)
HiSeq 2000HCIPaired-end200 bp715762859614817389112418.37356248
HiSeq 2000HCIMate-pair5.2 kb716982837018672628112423.15405884
HiSeq 2000HCIMate-pair10 kb721706482023890765512429.62454922
HiSeq 2000HCIPaired-end200 bp151329977648873138612460.60269186
HiSeq 2000HCIPaired-end200 bp852281871448052247912459.5847874
total =1580640276total =191.3396498
PacBio SequelRTLSMRT30 kb15051675044254.62472795
PacBio SequelRTLSMRT30 kb27286657274355.42416282
PacBio SequelRTLSMRT30 kb33294743290012.226995261
PacBio SequelRTLSMRT30 kb44931544926824.032488331
PacBio SequelRTLSMRT30 kb54472514466853.649041827
PacBio SequelRTLSMRT30 kb66876646867695.512641628
total =319137525.47005782
HiSeq 2500BYUMate-pair3kb15451229522558252878922.76845054
HiSeq 2500BYUMate-pair3kb25454775962559742728922.78171021
HiSeq 2500BYUMate-pair20kb12940393341168815379010.51933833
total =1384639882total =45.55016075
OxfordUNDNanoporeN/AMaxwell560869N/AN/A5.618462972
OxfordUNDNanoporeN/APC391059N/AN/A4.223690427
OxfordUNDNanoporeN/APC-SRE1594707N/AN/A3.521567316
OxfordUNDNanoporeN/APC-SRE2644389N/AN/A3.259168727
OxfordUNDNanoporeN/APC-SRE3522053N/AN/A5.103403101
total =2713077total =21.726292543