| Assembly software | ALLPATHS-LG | ALLPATHS-LG + PBJELLY | ALLPATHS-LG +PBJELLY+PILON | ALLPATHS-LG +PBJELLY + Quickmerge +PILON |
|---|---|---|---|---|
| Total Length scaffold (bp) | 2128820104 | 2314316492 | 2314078856 | 2257723393 |
| Longest scaffold (bp) | 11970359 | 12886104 | 12890361 | 27238941 |
| Longest contig (bp) | 386157 | 2025513 | 2020986 | 10156701 |
| Number of scaffolds | 17865 | 16317 | 16317 | 13224 |
| Number of contigs | 235067 | 94182 | 93330 | 52645 |
| Number of gaps | 217202 | 77865 | 77013 | 39421 |
| Scaffold N50 (bp) | 1191164 | 1357394 | 1358478 | 5589128 |
| Contig N50 (bp) | 20648 | 68275 | 68958 | 871274 |
| Gaps N50 (bp) | 3590 | 3972 | 3972 | 3961 |