Table 1 The S. glanis genome size, heterozygosity and repeat content as estimated by the GenomeScope and findGSE software
Genome characteristicsk-mer size
k = 17k = 21k = 25
GenomeScope
Genome haploid length (Mb)723.4753.6769.9
Genome repeat length (Mb)337.8216.8205.4
Genome unique length (Mb)385.6536.7564.5
Heterozygosity, %0.240.250.23
Estimated repetitive ratio,%46.728.826.7
Read error rate, %0.300.360.36
findGSE
Genome haploid length (Mb)822.6901.3906.5
Genome repeat length (Mb)395.1326.9300.2
Genome unique length (Mb)427.5574.5606.3
Estimated repetitive ratio, %48.036.333.1