Table 4 Inference error rates using different reference genomes compared to B73 for KE DH-lines. Only markers mapped on both the flint reference genome & B73v4 (Jiao et al. 2017) are considered for “critical” markers (error rate > 10%)
Reference genomeF7EP1DK105PE0075
Overlapping markers to B73v4352,326342,037338,882338,244
”Critical” markers when using this map109113115114
”Critical” markers when using B73v4271264262262
Relative change in error rate−5.11%−3.87%−4.68%−3.32%