Table 2 Mismatches between PCA and computational karyotypes in the Ag1000G validation sets
Matching karyotypesMismatched karyotypes
InversionTotal specimensNo. tags scoredNo. specimens% tags supporting scoreNo. Specimens% tags supporting score
2La337168-20333793.6-1000
2Rj-gambiae19594-9919583.8-1000
2Rb325304-34932577.5-97.70
2Rc-coluzzii8055-578078.9-1000
2Rc-gambiae19645-4919559.6-100167.3
2Rd-gambiae201128-14720155.2a-95.90
2Ru286124-17728676.6-1000
  • a Next highest value is 70.1%.