Table 2 Percentage of data sets where linkage phase configuration was correctly estimated for parents P and Q in simulation 2
Preferential pairing0.000.250.50
Quadrivalent formation0.000.250.500.000.250.500.000.250.50
Autotetraploid
Embedded ImageP100.099.091.598.598.590.080.593.087.5
100.099.599.598.599.597.557.588.597.0
99.597.598.5100.098.594.055.085.594.5
100.0100.099.599.098.098.060.586.593.0
99.599.597.098.597.095.567.584.597.5
Q100.098.590.0100.097.090.060.091.586.0
100.0100.098.099.5100.099.065.089.093.5
100.098.598.097.098.594.541.082.093.5
100.0100.099.099.598.098.056.584.590.0
99.599.598.099.098.594.558.082.094.0
Embedded ImageP100.099.593.0100.099.595.098.099.095.0
100.0100.0100.0100.0100.0100.090.099.599.0
100.099.5100.0100.0100.099.586.098.5100.0
100.0100.0100.099.5100.099.586.598.5100.0
100.0100.0100.0100.0100.0100.090.596.0100.0
Q100.099.593.0100.099.094.088.098.595.5
100.0100.0100.0100.0100.0100.091.599.599.5
100.099.5100.099.5100.099.085.098.0100.0
100.0100.0100.099.5100.099.586.097.598.5
100.0100.099.5100.0100.0100.092.096.099.0
Autohexaploid
Embedded ImageP84.078.570.569.063.561.02.510.519.0
99.094.091.093.084.580.06.516.022.0
89.094.088.080.084.080.510.516.032.5
93.090.586.088.584.080.09.016.528.5
96.092.591.589.594.087.519.030.544.5
Q85.081.071.068.052.557.51.53.58.5
99.095.091.086.590.088.59.028.037.5
90.090.086.079.082.077.09.518.028.0
96.592.589.590.089.089.025.535.541.0
95.092.092.589.591.088.016.023.039.0
Embedded ImageP86.084.575.577.569.572.527.036.552.5
100.097.596.598.598.091.055.570.574.5
91.595.593.090.594.589.568.068.577.5
96.594.091.099.599.096.565.078.585.0
98.098.5100.097.599.099.073.087.591.0
Q86.583.575.069.568.572.017.520.039.5
100.099.599.0100.099.5100.074.081.092.5
91.595.593.091.095.089.567.571.577.0
99.097.593.5100.0100.099.580.089.092.0
98.098.5100.097.599.099.083.083.090.5