Table 2 Summary of total and unique putative carotenoid gene [28] detections in top 1% of results across carotenoid traits by kernel TWAS with PEERS and PCs, multi-tissue TWAS with PCs, MLM GWAS, Fisher’s combined test of kernel TWAS with PEERS and PCs and MLM GWAS, and Fisher’s combined test of multi-tissue TWAS with PCs and MLM GWAS. On the left half of the table the number of detections exceeds the number of known genes because a gene is counted as detected each time it is in the top 1% of associations for the 30 carotenoid component traits
TestDetection of candidate genes in top 1% hits across carotenoid traits
TWAS38
multiTWAS32
GWAS55
FisherGWASTWAS75
FisherGWASmultiTWAS58