Table 3 Comparative presence of genes in fosmid-19 and BAC 156A12, sorghum chromosome 7 and S. italica chromosome VI
Sorghum1Setaria1Fosmid-19BAC 156A12
Sobic.007G163100Seita.6G253900Fosmid – C2
Sobic.007G163200
Sobic.007G163300
Sobic.007G163400Seita.6G253800Fosmid – C2
Sobic.007G163433
Sobic.007G163466
Sobic.007G163500[Seita.6G255200]2
Sobic.007G163600Seita.6G253700Fosmid – C1
Sobic.007G163700Seita.6G253600Fosmid – C1156A12 – C2
Sobic.007G163800 (ABCB1)Seita.6G253500 (ABCB1)Fosmid – C1156A12 – C2/C6
Sobic.007G163901
Sobic.007G164000[Seita.7G250000]2Fosmid – C1156A12 – C5/C1
  • 1 Orthology with sorghum and Setaria genes was determined by reciprocal BLASTN analysis of the coding region against the whole genome sequence.

  • 2 Genes within square brackets are orthologs located in non-colinear positions in Setaria.