Table 2 Significant QTL common between at least two traits
Seed LengthSeed WidthTKWYieldSpike LengthSpike WeightNo. of Spikelets
SNPChromPos (Mbp)Major AlleleMinor AlleleMAF-log(p)R2-log(p)R2-log(p)R2-log(p)R2-log(p)R2-log(p)R2-log(p)R2
S04_2201300534220.13GA0.203.382.593.352.40
S05_3665287095366.53GC0.425.224.303.352.40
S06_30049280630.05TC0.193.142.223.082.57
S06_3730709976373.07AC0.223.322.773.142.58
S06_5687932656568.79GA0.454.903.954.433.33
S11_16162600911161.63CT0.163.112.353.652.66
S11_24109295511241.09GA0.473.742.733.303.78
S11_597754431159.78GA0.263.422.633.572.59
S13_13478291313134.78AG0.103.272.493.812.79
S13_25246269013252.46TG0.344.063.514.704.14
S15_60091858415600.92CG0.413.322.804.553.87
S16_33665707716336.66CT0.423.222.453.162.23
S17_10865377517108.65AT0.183.702.893.292.35
S18_42650886218426.51AG0.083.522.723.062.16
S18_54544432018545.44TA0.053.012.033.352.75
S18_755767161875.58CG0.183.362.584.063.01
S20_60335655520603.36GC0.214.513.643.252.31
S21_41163022821411.63CT0.133.432.643.672.67
S21_907620512190.76AG0.135.854.913.652.66
Total R236.183.9540.5315.422.756.723.87