Table 5 QTL detected for end-use quality traits in a bread wheat (Triticum aestivum L.) RIL population derived from a cross between Glenn (PI-639273) and Traverse (PI-642780)
TraitaA-QTL nameOther associated traitsEnv.bChromosome/linkage groupLeft markerRight markerPosition (cM)cLODdAdditive effectPV(%)eConfidence intervalsPreviously identified A-QTL in the same chromosome region
FEAQ.FE.ndsu.1A.1I, X1A1BS00084022_51RAC875_c9700_989508.7788−0.493514.491148.5-50.5
FEAQ.FE.ndsu.1A.2GPCVII1A1wsnp_Ra_c15564_23999084wsnp_BG263358A_Ta_2_3947.6547−1.06119.401292.5-95.5
GPCAQ.GPC.ndsu.1AFEIII, V, VIII, VIIII1A1wsnp_Ra_c15564_23999084wsnp_BG263358A_Ta_2_3954.64760.237613.694193.5-96.5
BMTAQ.BMT.ndsu.1BMMLPIIV, VIII, VIIII1B1TA015141-0717wsnp_JD_c4444_5575748134.79450.173612.907512.5-13.5
BMTAQ.BMT.ndsu.1B.1VI, X1B1Kukri_c33561_564wsnp_Ku_c16938_259162601413.61840.130312.08513.5-14.5
BMTAQ.BMT.ndsu.1B.2MMLPTI, V1B1RAC875_c75885_302Tdurum_contig28305_106206.54890.180412.504319.5-20.5
GPCAQ.GPC.ndsu.1B.1MIXOPAVII1B1BS00064162_51Excalibur_rep_c101787_89573.90390.26838.176656.5-58.5
MIXOPAAQ.MIXOPA.ndsu.1B.1GPCIV1B1BS00064162_51Excalibur_rep_c101787_89573.90390.26837.735856.5-58.5
MMLPIAQ.MMLPI.ndsu.1B.1BMTVI, VIII, X1B1TA015141-0717wsnp_JD_c4444_5575748137.520310.758715.904812.5-13.5
MMLPIAQ.MMLPI.ndsu.1B.2MMLPT; MMLTV; BMTIV1B1RAC875_c75885_302Tdurum_contig28305_1062014.329633.575416.644119.5-20.5
MMLPTAQ.MMLPT.ndsu.1BBMTI, IV, V, VI, VII, VIII, VIIII, X1B1RAC875_c75885_302Tdurum_contig28305_1062015.20020.369824.426719.5-20.5Jin et al. 2016
MMLPWAQ.MMLPW.ndsu.1BV, X1B1wsnp_Ex_c2569_4780450Tdurum_contig65853_534624.61750.364311.457860.5-65.5
MMLTVAQ.MMLTV.ndsu.1BMMLPI; MMLPT; BMTIV1B1RAC875_c75885_302Tdurum_contig28305_106204.306212.13551.678419.5-20.5
BAAQ.BA.ndsu.1BI, IV, VIII, III1B3BS00093275_51BobWhite_c12960_13803.6756−0.40428.17740-2.5Tsilo et al. 2011
BMTAQ.BMT.ndsu.1DVIII, X1D1RAC875_rep_c105196_532BS00038418_517625.03660.198427.792374.5-76.5
BMTAQ.BMT.ndsu.2A.1GPCI2A1Excalibur_c27279_699Kukri_c44255_832378.2391−0.20412.840334.5-38.5
FEAQ.FE.ndsu.2A.1MMLPTV2A1BS00022903_51Ra_c34214_1320207.94380.873610.354419.5-22.5
GPCAQ.GPC.ndsu.2A.1BMTIV,V2A1Kukri_c44255_832RAC875_c13861_1248386.26870.435113.1937.5-39.5
GPCAQ.GPC.ndsu.2A.2MMLPTIII, X2A1wsnp_Ex_c28204_37349164Kukri_c77188_798184.9390.15968.002417.5-19.5
MMLPTAQ.MMLPT.ndsu.2A.1GPCI, III2A1wsnp_Ex_c28204_37349164Kukri_c77188_798185.2543−0.536116.345917.5-19.5
MMLPTAQ.MMLPT.ndsu.2A.2FEIII2A1BS00022903_51Ra_c34214_1320207.94380.873610.022319.5-22.5
GPCAQ.GPC.ndsu.2BI, III2B2BS00064658_51RAC875_c1755_971274.6386−0.15998.756723.5-27.5
BLVAQ.BLV.ndsu.2D.1II, X, III2D2Kukri_c31121_1460Kukri_c44769_75073.83654.43429.74135.5-8.5
BLVAQ.BLV.ndsu.2D.2VII, VIII2D2BobWhite_c6365_965D_GDS7LZN02FDZX8_26943.62178.551612.83483.5-4.5Tsilo et al. 2011
MMLPTAQ.MMLPT.ndsu.2DII, IV, VII, X2D3BS00011109_51wsnp_Ku_c8712_14751858204.3893−0.19186.524613.5-22
BMTAQ.BMT.ndsu.3AMMLPTI, V, VIIII, X3A2BobWhite_c38444_238Kukri_c10751_10314712.08270.121810.253746.5-48.5
GPCAQ.GPC.ndsu.3AIII, V, X3A2BS00022058_51Excalibur_c39808_453265.9339−0.3349.379621.5-28.5
MMLPTAQ.MMLPT.ndsu.3A.1BMTIV, VIIII, X3A2Kukri_c10751_1031wsnp_Ex_c1533_2930233496.89150.23459.504747.5-51.5
GPCAQ.GPC.ndsu.3B.1MMLPVX3B1wsnp_Ex_c47078_52393295D_GB5Y7FA01EIDVZ_263257.50820.20613.002322.5-27.5
MMLPVAQ.MMLPV.ndsu.3B.1GPCVIII3B1RFL_Contig1456_842wsnp_Ex_c47078_52393295245.35482.45467.594322.5-27.5
FEAQ.FE.ndsu.3BI, V, VII, X3B1Tdurum_contig82214_79wsnp_BE499016B_Ta_2_1688.5226−0.504615.295964.5-69.5Carter et al. 2012
BMTAQ.BMT.ndsu.3B.1II, V, X3B2Tdurum_contig12455_385Excalibur_c21708_55504.92250.07163.59880-0.5
BMTAQ.BMT.ndsu.3B.2MMLPI; MMLTVI, VIII3B2Excalibur_rep_c102270_677Kukri_c2227_58367.71530.193911.52945.5-6.5
MMLPIAQ.MMLPT.ndsu.3B.2BMT; MMLTV;IV3B2Excalibur_rep_c102270_677Kukri_c2227_58364.94068.9769.66935.5-6.5
MMLPTAQ.MMLPT.ndsu.3B.2IV, VI, VIII, X3B2Tdurum_contig15928_135BobWhite_c9424_24353.89310.17125.19464.5-5.5
MMLTVAQ.MMLTV.ndsu.3B.2BMT; MMLTV;V3B2Excalibur_rep_c102270_677Kukri_c2227_58363.41322.33319.8945.5-6.5
BAAQ.BA.ndsu.4AFE; MMLTVIV, VI, X4A1BS00022395_51BS00021957_511476.69310.254711.552144.5-148.5Jin et al. 2016
MMLPVAQ.MMLPV.ndsu.4AVII, X4A1TA004912-0408Kukri_c17417_7971505.8210.815813.7424149.5-150
MMLTVAQ.MMLTV.ndsu.4AFE; BAIV, V, X4A1Kukri_c35451_857BS00022395_511433.57320.73637.8228141.5-145.5
FEAQ.FE.ndsu.4A.1MMLTV;BAX4A1Kukri_c18346_556Kukri_c35451_8571424.5021−0.37766.9089141.5-144.5
BLVAQ.BLV.ndsu.4B.1BMTVI, X4B1RAC875_c39339_400RAC875_c17026_714974.0885−1.35947.443694.5-97.5
BMTAQ.BMT.ndsu.4B.1BLVIII, X4B1RAC875_c39339_400RAC875_c17026_714974.0885−1.35946.718194.5-97.5
GPCAQ.GPC.ndsu.4B1I, II4B1BobWhite_c47144_153Tdurum_contig10302_187946.6325−0.208615.000893.5-94.5
BAAQ.BA.ndsu.4B.1MIXOPAV4B1Excalibur_c39876_403Kukri_c19909_733704.7301−0.624311.239569.5-73.5
MIXOPAAQ.MIXOPA.ndsu.1B.1BAII4B1Excalibur_c39876_403Kukri_c19909_733705.0876−0.283812.334769.5-70.5
BAAQ.BA.ndsu.4D.1MELS; MERSI, III, V, VIIII, X4D1wsnp_JD_rep_c51623_35119179Ra_c350_837114.2653−0.372528.06170-1.5
MELSAQ.MELS.ndsu.4D.1BA; MERSIII, X4D1wsnp_JD_rep_c51623_35119179Ra_c350_83716.6917−3.000518.04030-1.5
MERSAQ.MERS.ndsu.4D.1BA; MELSIV, X4D1wsnp_JD_rep_c51623_35119179Ra_c350_83713.63620.434913.09940-2.5
BLVAQ.BLV.ndsu.5AIV,VI5A1Kukri_c28555_114wsnp_Ku_c18023_27232712366.9598−5.004915.800130.5-42.5
BLVAQ.BLV.ndsu.5BGPCX5B1BS00064297_51wsnp_BE499835B_Ta_2_5255.554218.54512.143811.5-35.5
FEAQ.FE.ndsu.5BV, X5B1Kukri_c3070_72BS00021993_512403.40370.29715.1324238.5-241
GPCAQ.GPC.ndsu.5BBLVI, II, IV, V, VII, VIIII, X5B1BS00032003_51wsnp_BE499835B_Ta_2_51410.36620.319620.18389.5-20.5
MIXOPAAQ.MIXOPA.ndsu.5BII, III5B1wsnp_Ex_c2582_4804223Tdurum_contig10268_10001533.53640.344812.2996152.5-153.5
MMLPTAQ.MMLPT.ndsu.5BI, VII5B1RAC875_c33933_350JD_c9261_426493.7684−0.24477.264248.5-63.5
BMTAQ.BMT.ndsu.5DMMLPTIV, V, X5D1BS00110953_51Excalibur_c16573_197184.5987−0.06983.43659.5-19.5
MMLPTAQ.MMLPT.ndsu.5DBMTIV, VI, VIII, VIIII, X5D1BS00110953_51Excalibur_c16573_197197.4008−0.196315.392512.5-19.5
BLVAQ.BLV.ndsu.6BCTCLII, III6B1BobWhite_c10140_297BobWhite_c8571_699526.14935.5615.430551.5-52.5
CBCLAQ.CBCL.ndsu.6BII, X6B1CAP8_c1678_709Kukri_c23433_416464.49270.03783.130344.5-46.5Groos et al. (2007)
CTCLAQ.CTCL.ndsu.6B.1BLVIII6B1BobWhite_c10140_297BobWhite_c8571_699525.53190.290516.367651.5-52.5
FEAQ.FE.ndsu.6BII, IV, X6B1BobWhite_c30500_527Excalibur_c31379_71955.4465−0.37538.36794.5-95.5
BAAQ.BA.ndsu.6DII, VIII6D1wsnp_Ex_c23383_32628864BobWhite_c13435_700434.6326−1.32043.761941.5-44.5
BLVAQ.BLV.ndsu.7A.1IV, X7A1Excalibur_rep_c109881_701Tdurum_contig16202_319594.57131.4398.345458.5-59.5
BLVAQ.BLV.ndsu.7A.2IV, X7A1RAC875_c9012_276BobWhite_c15497_1991186.58151.764612.6133116.5-118.5
BMTAQ.BMT.ndsu.7AIV, X7A1Excalibur_c44794_122RAC875_c55351_22355.52870.07644.12061.5-6.5
CTCLAQ.CTCL.ndsu.7AMMLPVIII, X7A1Excalibur_c33589_373RAC875_rep_c111778_387865.68570.01615.711685.5-86.5
GPCAQ.GPC.ndsu.7A.1MMLPTII7A1BobWhite_c23261_226BS00022970_51244.24430.18486.551422.5-24.5
MMLPTAQ.MMLPT.ndsu.7A.1GPCVIII7A1BobWhite_c23261_226BS00022970_51243.6069−0.22285.942323.5-24.5
MMLPVAQ.MMLPV.ndsu.7A.1CTCLIV7A1Excalibur_c33589_373RAC875_rep_c111778_387864.13381.889811.275584.5-86.5
GPCAQ.GPC.ndsu.7AIV, VII, VIII, X7A2BobWhite_c55693_396BS00023003_51164.61880.15077.135315.5-17Christov et al. 2007
BLVAQ.BLV.ndsu.7BV, X7B1BobWhite_c41356_62wsnp_CAP7_c44_26549333.76353.425110.709131.5-39.5
MMLPTAQ.MMLPT.ndsu.7BI, III7B1BobWhite_c44404_312CAP12_c1816_325424.3413−0.36443.689441.5-50.5
BMTAQ.BMT.ndsu.7DI,V7D1Kukri_c23468_590Kukri_c16416_647123.44430.12534.82857.5-13.5
FEAQ.FE.ndsu.7DIV, VI7D2RAC875_c39217_314Excalibur_c16580_38813.5180.761111.19630-3.5
DOAQ.DO.ndsu.7DVI, X7D3wsnp_BE490643D_Ta_2_1BobWhite_rep_c65034_450714.1343−0.057213.668770.5-72.5
MMLPTAQ.MMLPT.ndsu.7DI, III7D3IAAV6265BobWhite_c7263_337273.5440.3153.023325.5-32.5
  • a GPC: grain protein content, BMT: bake mixing time, BA: baking absorption, BLV: bread loaf volume, CBCL: crumb color, CTCL: crust color, FE: flour extraction rate, MIXOPA: the general mixograph pattern, MELS: mixograph envelope left slope, MERS: mixograph envelope right slope, MMLPT: mixograph MID line peak time, MMLPV: mixograph MID line peak value, MMLTV: mixograph MID line time * value, MMLPW: mixograph MID line peak width, MMLPI: mixograph MID line peak integral, DO: dough character.

  • b I: Prosper 2012, II: Carrington 2012, III: Casselton 20012, IV: Prosper 2013, V: Carrington 2013, VI: Minot 2013, VII: Prosper 2014, VIII: Carrington 2014, VIII: Minot 2014, X: BLUP values across all locations.

  • c centimorgan.

  • d Log of the Odds.

  • e Phenotypic variation.