Table 1 Median number of SNPs included in the model and median percent variance explained (PVE) by the model for each trait for the Arabidopsis thaliana Ws-2 × C24, Ws-2 × Ler and Ler × Ws-2 RIL sets. 95% credible intervals around the median are shown in parentheses | Ws-2 × C24 RIL set | Ws-2 × Ler RIL set | Ler × Ws-2 RIL set |
|---|
| Median SNP | Median PVE | Median SNP | Median PVE | Median SNP | Median PVE |
|---|
| June Circadian Period | 9 (0-62) | 0.47 (0.25-0.67) | 7 (0-61) | 0.14 (0.01-0.42) | 6 (0-61) | 0.14 (0.01-0.45) |
| July Circadian Period | 10 (0-61) | 0.36 (0.11-0.66) | 13 (0-64) | 0.54 (0.30-0.75) | 7 (0-60) | 0.26 (0.06-0.52) |
| Sept. Circadian Period | 7 (0-61) | 0.09 (0-0.30) | 7 (0-61) | 0.06 (0-0.24) | 8 (0-61) | 0.38 (0.09-0.69) |
| June Circadian Phase | 12 (0-63) | 0.48 (0.25-0.66) | 6 (0-60) | 0.07 (0-0.28) | 9 (0-62) | 0.25 (0.03-0.55) |
| July Circadian Phase | 8 (1-57) | 0.55 (0.22-0.82) | 10 (0-63) | 0.23 (0.03-0.49) | 5 (0-60) | 0.06 (0.00-0.27) |
| Sept. Circadian Phase | 8 (0-62) | 0.13 (0-0.35) | 6 (0-61) | 0.05 (0-0.22) | 7 (0-61) | 0.12 (0.01-0.39) |
| Cauline Leaf Number | 6 (0-60) | 0.49 (0.28-0.68) | 7 (0-60) | 0.20 (0.02-0.48) | 12 (0-64) | 0.49 (0.19-0.74) |
| Cauline Branches | 6 (0-59) | 0.52 (0.31-0.71) | 9 (0-62) | 0.17 (0.01-0.43) | 12 (0-63) | 0.38 (0.12-0.63) |
| Rosette Leaf Number | 5 (2-43) | 0.78 (0.51-0.92) | 6 (1-57) | 0.36 (0.14-0.59) | 13 (0-63) | 0.61 (0.35-0.82) |
| Rosette Branches | 14 (0-64) | 0.65 (0.42-0.83) | 14 (0-63) | 0.49 (0.24-0.71) | 7 (1-59) | 0.53 (0.29-0.73) |
| Rosette Meristem Fate | 7 (0-61) | 0.27 (0.03-0.57) | 9 (0-62) | 0.19 (0.02-0.43) | 10 (0-62) | 0.53 (0.31-0.72) |