Table 2 Genome assembly statistics*
NameGenome size (bp)ContigsLargest contig (bp)N50 (bp)L50
FlyBase r6.16*142,573,0242,44227,905,05321,485,5383
MiniMap131,856,35320816,991,5013,866,6869
DBG2OLC131,359,67833913,129,0709,907,7306
Canu139,205,73729514,326,0642,971,26211
QuickMerge 2x138,130,51925025,434,90118,616,2664
QM2x Nanopolish139,303,90325025,367,20118,818,6774
QM2x NP + Pilon x2140,153,08025025,783,28018,923,8714
QuickMerge 2x Bionano142,817,82923128,580,42721,305,1473
  • * Values are for scaffolds, not contigs.