Table 2 Distribution, heterozygosity and linkage disequilibrium (LD, r2) of molecular markers (SNP and DArT), genotyped and analyzed individually for all chromosomes
ChromosomeLength (Mb)Marker countSNP HeterozygosityAverage LD (r2)
SNPDArTTotalSNPDArTSNP+DArT
152.023202866060.98%0.03780.03640.0361
249.014584098670.76%0.05940.06100.0594
352.183583647220.90%0.04410.03710.0399
445.801792604390.86%0.06150.04320.0494
540.572512825330.84%0.03790.03200.0338
631.952872505371.01%0.04450.04300.0432
751.713072996060.83%0.04050.03510.0367
859.633183917090.96%0.03670.03140.0331
937.423152956100.87%0.03020.02760.0280
1043.251972614581.03%0.03210.03450.0326
1150.002443465900.80%0.06990.04630.0539
Total513.543234344366770.89%0.03600.03300.0312