Table 2 TAS2R38 linkage disequilibrium and haplotype frequencies
AA (N = 304)
LD analysisSNP1SNP2R^2DDprime
rs10246939rs17268660.49−0.16−1.00
rs10246939rs7135980.950.240.99
rs1726866rs7135980.46−0.16−0.98
HAPLOC:G:G:307T:A:C:190T:G:C:104C:G:C:5T:A:G:2
PAVAVIAAIAAVPVI
CAU (N = 201)
LD analysisSNP1SNP2R^2DDprime
rs10246939rs17268660.98−0.25−0.99
rs10246939rs7135980.840.231.00
rs1726866rs7135980.84−0.23−1.00
HAPLOC:G:G:170T:A:C:214T:G:C:1C:G:C:16C:A:C:1
PAVAVIAAIAAVAVV
  • Statistical analyses of linkage disequilibrium (LD) are represented by R-squared (R^2), D, and Dprime values of the pairwise comparisons of the indicated SNPs from the AA and CAU participants. The plus strand haplotype sequence (HAPLO), the count of each haplotype, and the resulting amino acid sequence of the allele are indicated from the AA and CAU participants.