Table 2 Transposable element repeat class analysis
Repeat Element FamilyNumber Unique ElementsTotal Number Elements in AssemblyCumulative Length (bp)Percent of Genome Assemblya
Class I – retrotransposons3612,9898,843,5602.1
Class II – DNA transposons10661,52416,133,7273.8
Total classified transposons14274,51324,977,2875.9
Unclassified424522,856138,407,54632.6
Total repeat families566597,369163,384,83338.5
  • a The percentage was calculated excluding all stretches of N in the scaffolds.