Table 1 Details on genomic resequencing and read mapping
Reference (W82.a2.va)Number of chromosomes20
Number of scaffolds1,170
Total reference length (bp)978,495,272
Mapped reads (PI 603408)Total read count585,030,981
Mean mapped read length (bp)99.9
Mapped total read length (bp)58,431,063,227
Mean coverage59.1-fold
Mean coverage excluding zero coverage regions62.9-fold
Mean paired end distance (bps)180.5
Unaligned reads (PI 603408)Total read count94,436,522
Unaligned percentage of all reads16.1
Zero coverage regions (PI 603408)Mean length (bp)277.34
Count210,157
Total length (bps)58,284,351
Percentage of genome (%)6.0