Table 3 Allele-specifically expressed genes from the Feml2 region
Gene NameChr.Gene Start–EndCAST/EiJ Mean tpmC57BL/6J Mean tpmCAST/EiJ Mean Eff. CountsC57BL/6J Mean Eff. CountslogFCaP-ValueFDR
Gramd2959,680,144–59,718,8745.114.225343390.690.0020.11
Larp6960,712,989–60,738,8012.131.402161420.640.0050.11
Adpgk959,291,572–59,316,1995.668.72586893−0.600.0130.13
Ubl7957,910,986–57,929,9684.493.142471740.540.0120.13
Rec114958,652,850–58,743,9642.121.0443191.090.0080.13
Glce962,057,248–62,122,6552.061.463412540.490.0210.17
  • Chr., chromosome; tpm, transcripts per million; Eff., effect; FDR, false discovery rate.

  • a Positive logFC values correspond to favored CAST/EiJ expression, while negative logFC values correspond to favored C57BL/6J expression.