Conservative Model | Powerful Model | Annotation | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|

SNP | A1 | Freq. | Covariates^{a} | Covariates | Treatment | Trait | Group # | F-Statistic | Gene | |||||||

3_8965883 | A | 0.0508 | 0.692 | 0.127 | 7.01 | 0.703 | 0.127 | 7.18 | Low Mg | S | 1 | RSY3 | ||||

4_6353940 | T | 0.0578 | 0.538 | 0.123 | 4.79 | 0.636 | 0.121 | 6.54 | High Mg | RGT | 2 | 5168 (p < 1e−16) | AT4G10200 | |||

5_20010406 | T | 0.0508 | 0.449 | 0.13 | 3.19 | 1.430 | 0.186 | 12.69 | High Mg | K | 3 | 434 (p < 1e−16) | AT5G49350 |

Each SNP had 32 models evaluated by Open GWAS algoriTHm (OATH) via naïve summary statistics. The smallest (conservative model) and the largest (powerful) were tabulated. SNP, single nucleotide polymorphism; Freq., frequency; S, sulfur; RGT, days to root germination; K, potassium.

↵a “+” and “−” indicate inclusion and exclusion of the

*j*th covariate.