Table 3 Summary of GO terms overrepresented in differentially expressed P. lambertiana genes
GO-IDTermCategoryFDR
NACLR
 GO:0042555MCM complexC0.049359
 GO:0043168Anion bindingF7.84E−18
 GO:0005524ATP bindingF2.14E−09
 GO:0016887ATPase activityF0.004976
 GO:0005034Osmosensor activityF0.046233
 GO:0010817Regulation of hormone levelsP6.04E−06
 GO:0048767Root hair elongationP0.006801
 GO:0009809Lignin biosynthetic processP0.023398
JASS
 GO:0010583Response to cyclopentenoneP0.007481
 GO:0043207Response to external biotic stimulusP0.021576
 GO:0051707Response to other organismP0.021576
 GO:0051567Histone H3-K9 methylationP7.68E−09
 GO:0042742Defense response to bacteriumP0.028652
 GO:0010476Gibberellin-mediated signaling pathwayP0.011213
 GO:0042221Response to chemicalP1.90E−07
Wound
 GO:0006950Response to stressP8.39E−09
 GO:0006952Defense responseP2.54E−06
 GO:0005911Cell–cell junctionC0.000132
 GO:0030855Epithelial cell differentiationP0.010485
 GO:0060429Epithelium developmentP0.017064
 GO:0042545Cell wall modificationP0.035399
Reproductive tissue
 GO:0009751Response to salicylic acidP0.002236
 GO:0010333Terpene synthase activityF6.87E−14
 GO:0048506Regulation of timing of meristematic phase transitionP0.000373
 GO:0007389Pattern specification processP0.002009
 GO:0009955Adaxial/abaxial pattern specificationP0.008520
 GO:0007165Signal transductionP1.66E−17
 GO:0050793Regulation of developmental processP2.67E−05
 GO:0010476Gibberellin-mediated signaling pathwayP0.000174
  • GO-ID, Gene Ontology identifier; FDR, false discovery rate; NACLR, NaCl-treated; MCM, minichromosome maintenance protein complex; C, cellular component; F, molecular function; ATP, adenosine triphosphate; P, biological process; JASS, methyljasmonate-treated.