Table 2 Overlap of mRNAs that are bound or regulated by Smaug, and those that are targets of miRNAs that are downregulated in smaug mutants
DatasetNumberOverlapP ValueaOdds Ratio
Expressed genes for Smaug-dependent decay (embryos 2–3 hr)3956
Smaug-dependent decay genes (embryos 2–3 hr, 5% FDR)b418
Smaug-dependent-miR target genes15071514.9 × 10−61.6
Expressed genes for Smaug-dependent decay (embryos 2–3 hr)3956
Smaug-dependent decay genes (embryos 2–3 hr, 5% FDR)c341
Smaug-dependent-miR target genes15071283.1 × 10−61.7
Expressed genes for Smaug-RIP (embryos 0–3 hr)4481
Smaug-RIP genes (embryos 0–3 hr, 5% FDR)339
Smaug-dependent-miR target genes12001010.111.1
  • FDR, false discovery rate; miR, microRNA.

  • a One-tailed Fisher’s exact test.

  • b Smaug-dependent decay genes list including Smaug-IP-genes.

  • c Smaug-dependent decay genes list without Smaug-IP-genes.