Table 3 Theoretical frequencies of the eight identifiable genotypes in the clonal F1 population
GenotypeLocus 1Scenario 2 (Table 1)Scenario 3 (Table 1)Sample Size
Locus 2 (X2 = A2 or B2)FrequencyLocus 2 
(X2 = C2 or D2)Frequency
1A1C1X2C2FormulaA2X2Formulan1
2A1C1X2D2FormulaB2X2Formulan2
3A1D1X2C2FormulaA2X2Formulan3
4A1D1X2D2FormulaB2X2Formulan4
5B1C1X2C2FormulaA2X2Formulan5
6B1C1X2D2FormulaB2X2Formulan6
7B1D1X2C2FormulaA2X2Formulan7
8B1D1X2D2FormulaB2X2Formulan8
  • For scenarios 2 and 3 (Table 1). A1, B1, C1, and D1 are the four alleles at locus 1. For scenario 2, X2 (=A2 or B2), C2, and D2 are the three alleles at locus 2. For scenario 3, A2, B2, and X2 (=C2 or D2) are the three alleles at locus 2. Recombination frequencies in the female and male parents are denoted as rF and rM, respectively. The last column gives the symbol of observed sample size of each genotype.