Table 6 MAP7 SNVs
PositionResistGeneMutationCodonSiteSubstitution
537,227RifRHI0515 (rpoB)C→T6191Ala→Thr
537,378G→T5683Asn→Lys
587,579aNovRHI0567 (gyrB)G→T1401Gln→Lys
587,846aC→A511Ala→Ser
587,969aC→A101Gly→Cys
597,885KanRHI0579 (fusA)G→C6552Pro→Arg
600,806StrRHI0581 (rpsL)T→C432Lys→Arg
839,913SpcRHI0778 (rplD)G→C652Gly→Ala
935,046HI0883 (unk)A→C3563GlyGly
1,344,100aNalRHI1264 (gyrA)C→A881Asp→Tyr
  • SNVs detected in MAP7 reads against the Rd reference that were also SNVs in the recipient reads, as well as positions with ambiguous/mixed genotype calls, are not reported. SNV, single-nucleotide variation.

  • a These variants are also present in the donor RR3131 (86-028NP NovR NalR)