Table 2 Summary of nine diploid WGS re-sequencing libraries that were re-sequenced in this study and additional libraries (A1_97, F1_1, and Maxxa) obtained from the SRA
AccessionPIRaw PairsTrimmed ReadsRaw Mapping %Mapped % Using SNP Index 2.0
A1_155630024385,657,228761,269,88465.378.0
A1_73485587202,723,343238,035,92953.185.6
A1_97529670328,713,056652,350,33565.077.8
A2_1011629339412,420,252816,274,49558.373.8
A2_255615756300,406,057595,289,59161.175.5
A2_34183160367,844,399729,370,24862.376.5
A2_4418578878,180,657153,728,82363.376.9
A2_4529707343,470,023686,940,04648.982.4
D5_2530899152,913,856304,706,88695.695.3
D5_31530928217,334,954428,323,70395.895.5
D5_4530901310,387,080616,432,52195.194.8
D5_53530950188,469,224375,193,26896.296.0
F1_1530986534,258,8391,055,751,86371.179.1
Maxxa Acala540885463,761,132919,898,04272.579.8