Table 3 Linkage disequilibrium blocks and gene content in sorghum chromosomes
Flanking Single-Nucleotide Polymorphisms
Chr No.Left SideRight SideBlock Size, kbAverage r2 ValueAverage p ValueGene Content
1chr1_55780969, chr1_55780970, chr1_55780974, chr1_55780977chr1_55777086, chr1_55777124, chr1_55777130, chr1_557771423.80.920Sb01g032830
(GS3 homolog)
2chr2_75846165, chr2_75846205, chr2_75846214, chr2_75846217chr2_75806815, chr2_75806843, chr2_75806854, chr2_75825274, chr2_7582528320.9-39.70.741.71 × 10−42Sb02g042100 (4-alpha-glucanotransferase) (two additional genes code for unknown proteins)
9chr9_57923745, chr9_57947592, chr9_57947624chr9_57912902, chr9_57912904, chr9_57912941, chr9_5791295610.8-34.60.893.72 × 10−41Sb09g029140 (NF-Y B subunit) within the 10.8 kb block
10chr10_3499404chr10_3463833, chr10_3463834, chr10_3463835, chr10_3463837, chr10_3463838, chr10_3463842, chr10_346384735.50.772.61 × 10−36Sb10g003940 (FT homolog) (two additional genes code for unknown proteins)