Table 1 Genes previously associated with learning and memory with transcript isoforms that differ significantly in abundance between naïve and trained males 24 hr after training
FlybaseGeneTranscriptFold DifferenceaFDR q Value
FBgn0000479dunceFBtr0070522Only in traineda1.05E-09
FBgn0038934Gld2FBtr0084200Only in traineda3.19E-05
FBgn0261854aPKCFBtr03034363.34 up1.63E-03
FBgn0023479tequilaFBtr00765283.32 up7.08E-28
FBgn0028734Fmr1FBtr03013862.99 up1.07E-08
FBgn0004648silverFBtr00700852.79 up1.30E-13
FBgn0003520staufenFBtr03016142.28 up1.72E-09
FBgn0003396schnurriFBtr00880992.19 up1.35E-09
FBgn0041111lilliputianFBtr02900412.10 up8.00E-03
FBgn0035938orb2FBtr00765611.81 up5.00E-04
FBgn0038975Nrx-1FBtr03014851.71 up7.63E-21
FBgn0003380ShFBtr03039021.64 up2.00E-03
FBgn0000054Adf1FBtr00861131.64 up1.00E-02
FBgn0259243Pka-R1FBtr02998911.59 up3.30E-02
FBgn0030412tomosynFBtr00736781.59 up8.65E-07
FBgn0250753exbaFBtr00787471.49 up1.00E-02
FBgn0004648silverFBtr00700871.36 up4.00E-03
FBgn0259246brpFBtr02999161.33 up2.00E-03
FBgn0259246brpFBtr02999151.30 up6.00E-03
FBgn0016917Stat92EFbtr01004571.30 up2.00E-02
FBgn0030412tomosynFBtr03003761.29 up2.00E-02
FBgn0004624CamKIIFBtr01001461.28 up3.00E-03
FBgn0000536easFBtr00742121.17 up2.00E-02
FBgn0086902kisFBtr00781441.09 up3.00E-02
FBgn0003501Src64bFBtr010050411.38 down2.59E-06
FBgn0030412tomosynFBtr00736767.73 down5.14E-14
FBgn0000536easFBtr00742132.86 down3.03E-05
FBgn0035938orb2FBtr00765642.65 down2.00E-03
FBgn0004624CamKIIFBtr01001482.31 down2.16E-08
FBgn0038975Nrx-1FBtr00842562.20 down5.80E-25
FBgn0259243Pka-R1FBtr03026392.07 down2.70E-08
FBgn0000422DdcFBtr00811661.89 down1.00E-03
FBgn0000054Adf1Fbtr00861121.89 down3.00E-03
FBgn0259246brpFbtr03005421.65 down6.23E-05
FBgn0035938orb2FBtr00765621.46 down3.00E-02
FBgn0016917Stat92EFbtr00894871.41 down4.00E-03
FBgn0004648silverFBtr02900171.40 down5.00E-03
FBgn0028734Fmr1FBtr00821981.40 down1.00E-03
FBgn0003396schnurriFBtr00881011.39 down3.00E-03
FBgn0003392ShiFBtr00741231.36 down1.00E-03
FBgn0004648silverFBtr00700861.31 down6.14E-07
FBgn0003371sggFBtr00704671.28 down2.00E-03
FBgn0037913fabpFBtr01003211.10 down2.00E-03
FBgn0013334Sap47FBtr03016551.10 down3.00E-02
  • Columns include: Flybase identification (Flybase), gene symbol (Gene), transcript identification (Transcript), fold difference, and FDR q value. FDR, false discovery rate.

  • a “Only in trained” indicates that these transcript isoforms had sequence reads that were only detected in trained males and not in naïve males; “up” and “down” indicate transcripts that are either up-regulated or down-regulated in trained flies, respectively.