Table 4  Synonymous (S) and nonsynonymous (NS) changes in mating-type linked and unlinked genes
Gene namePosition (kb)No. amino acids
(fraction of NS and S
changes)NS
NG30/ac17S
NG30/ac17
Mating-type linked genes and their map position in reference (V4)
NIC7(342432-344301)6331/120/22
0.0015 (NS)
0.031–0.035 (S)
ALB3.1(387003-390870)4953/35/6
0.006 (NS)
0.01–0.012 (S)
GCSH(612078-614002)1592/22/2
0.0125 (NS)
0.0125 (S)
UTP1(789721-794290)9969/1012/13
0.009–0.10 (NS)
0.012–0.013 (S)
SAD1(883075-898052)402714/1619/20
0.003–0.004 (NS)
0.0047–0.005 (S)
MAT3(939371-945298)12134/416/16
0.0049 (NS)
0.013 (S)
THI10(931565-934443)2773/34/6
0.010 (NS)
0.014–0.020 (S)
FA1a(1199816-1210569)17870/00/0
0
LEU2(1363805-1371222)4442/25/5
(0.004) (NS)
(0.011) (S)
IFT139(2451412-2466548)13470/00/0
0
Genes in corresponding pathways on other chromosomes
NIC15chromosome 126690/00/0
FA2chromosome 76180/00/0
ALB3.2chromosome 124220/00/0
OGD2chromosome 74500/00/0
WDR36chromosome 107300/00/0
SAG1chromosome 834090/00/0
DP1chromosome 76460/00/0
THI4chromosome 43570/00/0
IDH3chromosome 24830/00/0
IFT144chromosome 1313840/00/0
  • a The FA1 gene has an insertion of a single base (G) at position 1208943 in the ac17 mutant strain. The wild-type protein is 1787 aa long; the mutant protein would be 1742 aa. Their amino acid sequences differ after amino acid position 1686. No other indel were observed.