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G3: Genes | Genomes | Genetics

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G3: Genes | Genomes | Genetics

Advanced Search

  • HOME
  • ISSUES
    • Current Issue
    • Early Online
    • Archive
  • ABOUT
    • About the journal
    • Why publish with us?
    • Editorial board
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  • SERIES
    • All Series
    • Genomic Prediction
    • Multiparental Populations
  • ARTICLE TYPES
    • About Article Types
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    • Mutant Screen Reports
    • Software and Data Resources
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  • A mountain pepper MADS-box gene plays an important role in fruit architecture
  • Explore regeneration-associated gene expression and chromatin accessibility using Regeneration Rosetta
  • Machine learning enables high-throughput phenotyping of bulliform cells in maize
  • Genome wide association study for wheat improvement in Western Siberia
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Current Issue

G3: Genes|Genomes|Genetics: 9 (12)

Volume 9 Issue 12, December 2019

Current Issue

G3: Genes|Genomes|Genetics: 9 (12)

Volume 9 Issue 12, December 2019

  • Current Issue
  • Early Online
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Genome Reports

  • Genome of Spea multiplicata, a Rapidly Developing, Phenotypically Plastic, and Desert-Adapted Spadefoot Toad
    Fabian Seidl, Nicholas A. Levis, Rachel Schell, David W. Pfennig, Karin S. Pfennig, Ian M. Ehrenreich
  • Genome Assemblies of Two Rare Opportunistic Yeast Pathogens: Diutina rugosa (syn. Candida rugosa) and Trichomonascus ciferrii (syn. Candida ciferrii)
    Verónica Mixão, Ester Saus, Antonio Perez Hansen, Cornelia Lass-Florl, Toni Gabaldón
  • A Highly Contiguous Reference Genome for Northern Bobwhite (Colinus virginianus)
    Jessie F. Salter, Oscar Johnson, Norman J. Stafford, William F. Herrin, Darren Schilling, Cody Cedotal, Robb T. Brumfield, Brant C. Faircloth
  • The de Novo Reference Genome and Transcriptome Assemblies of the Wild Tomato Species Solanum chilense Highlights Birth and Death of NLR Genes Between Tomato Species
    Remco Stam, Tetyana Nosenko, Anja C. Hörger, Wolfgang Stephan, Michael Seidel, José M. M. Kuhn, Georg Haberer, Aurelien Tellier
  • The Genome Sequence of the Eastern Woodchuck (Marmota monax) – A Preclinical Animal Model for Chronic Hepatitis B
    Tyler S. Alioto, Fernando Cruz, Jèssica Gómez-Garrido, Miriam Triyatni, Marta Gut, Leonor Frias, Anna Esteve-Codina, Stephan Menne, Anna Kiialainen, Nadine Kumpesa, Fabian Birzele, Roland Schmucki, Ivo G. Gut, Olivia Spleiss

Software and Data Resources

  • Regeneration Rosetta: An Interactive Web Application To Explore Regeneration-Associated Gene Expression and Chromatin Accessibility
    Andrea Rau, Sumona P. Dhara, Ava J. Udvadia, Paul L. Auer
  • An Atlas of Transcription Factors Expressed in Male Pupal Terminalia of Drosophila melanogaster
    Ben J. Vincent, Gavin R. Rice, Gabriella M. Wong, William J. Glassford, Kayla I. Downs, Jessica L. Shastay, Kenechukwu Charles-Obi, Malini Natarajan, Madelaine Gogol, Julia Zeitlinger, Mark Rebeiz

Investigations

  • Genomics Analysis of L-DOPA Exposure in Drosophila sechellia
    Stephen M. Lanno, Ivy Lam, Zachary Drum, Samuel C. Linde, Sara M. Gregory, Serena J. Shimshak, Mariel V. Becker, Kerry E. Brew, Aashli Budhiraja, Eliza A. Carter, Lorencia Chigweshe, Keagan P. Collins, Timothy Earley, Hannah L. Einstein, Angela A. Fan, Sarah S. Goss, Eric R. Hagen, Sarah B. Hutcheon, Timothy T. Kim, Mackenzie A. Mitchell, Nola R. Neri, Sean E. Patterson, Gregory Ransom, Guadalupe J. Sanchez, Bella M. Wiener, Dacheng Zhao, Joseph D. Coolon
  • Efficiency of a Constrained Linear Genomic Selection Index To Predict the Net Genetic Merit in Plants
    J. Jesus Cerón-Rojas, Jose Crossa
  • Natural Genetic Variation Screen in Drosophila Identifies Wnt Signaling, Mitochondrial Metabolism, and Redox Homeostasis Genes as Modifiers of Apoptosis
    Rebecca A. S. Palu, Elaine Ong, Kaitlyn Stevens, Shani Chung, Katie G. Owings, Alan G. Goodman, Clement Y. Chow
  • Identification of Genes Required for Apical Protein Trafficking in Drosophila Photoreceptor Cells
    Azadeh Laffafian, Ulrich Tepass
  • The Magnitude of Candida albicans Stress-Induced Genome Instability Results from an Interaction Between Ploidy and Antifungal Drugs
    Ognenka Avramovska, Meleah A. Hickman
  • The Trithorax Group Factor ULTRAPETALA1 Regulates Developmental as Well as Biotic and Abiotic Stress Response Genes in Arabidopsis
    Ludmila Tyler, Mark J. Miller, Jennifer C. Fletcher
  • Genetic Architecture of Chilling Tolerance in Sorghum Dissected with a Nested Association Mapping Population
    Sandeep R. Marla, Gloria Burow, Ratan Chopra, Chad Hayes, Marcus O. Olatoye, Terry Felderhoff, Zhenbin Hu, Rubi Raymundo, Ramasamy Perumal, Geoffrey P. Morris
  • Investigating the Influence of Glycerol on the Utilization of Glucose in Yarrowia lipolytica Using RNA-Seq-Based Transcriptomics
    Patrice Lubuta, Mhairi Workman, Eduard J. Kerkhoven, Christopher T. Workman
  • Inference of Selection from Genetic Time Series Using Various Parametric Approximations to the Wright-Fisher Model
    Cyriel Paris, Bertrand Servin, Simon Boitard
  • rmtA-Dependent Transcriptome and Its Role in Secondary Metabolism, Environmental Stress, and Virulence in Aspergillus flavus
    Timothy Satterlee, Sarah Entwistle, Yanbin Yin, Jeffery W. Cary, Matthew Lebar, Liliana Losada, Ana M. Calvo
  • Targeted Forward Genetics: Population-Scale Analyses of Allele Replacements Spanning Thousands of Base Pairs in Fission Yeast
    Aaron J. Storey, Hsin-Ping Wang, Reine U. Protacio, Mari K. Davidson, Wayne P. Wahls
  • OsSPL10, a SBP-Box Gene, Plays a Dual Role in Salt Tolerance and Trichome Formation in Rice (Oryza sativa L.)
    Tao Lan, Yali Zheng, Zilong Su, Shibo Yu, Haibing Song, Xiaoya Zheng, Gege Lin, Weiren Wu
  • Selecting Closely-Linked SNPs Based on Local Epistatic Effects for Haplotype Construction Improves Power of Association Mapping
    Fang Liu, Renate H. Schmidt, Jochen C. Reif, Yong Jiang
  • Transcriptome Characterization of Reverse Development in Turritopsis dohrnii (Hydrozoa, Cnidaria)
    Yui Matsumoto, Stefano Piraino, Maria Pia Miglietta
  • Ectopic Expression of Litsea cubeba LcMADS20 Modifies Silique Architecture
    Yulian Jiao, Hengfu Yin, Yicun Chen, Ming Gao, Liwen Wu, Yangdong Wang
  • Loss of rps9 in Zebrafish Leads to p53-Dependent Anemia
    Cheng Chen, Haigen Huang, Ruibin Yan, Shuo Lin, Wei Qin
  • Accurate Allele Frequencies from Ultra-low Coverage Pool-Seq Samples in Evolve-and-Resequence Experiments
    Susanne Tilk, Alan Bergland, Aaron Goodman, Paul Schmidt, Dmitri Petrov, Sharon Greenblum
  • Assessing by Modeling the Consequences of Increased Recombination in Recurrent Selection of Oryza sativa and Brassica rapa
    Elise Tourrette, Rex Bernardo, Matthieu Falque, Olivier C. Martin
  • Classification-Based Inference of Dynamical Models of Gene Regulatory Networks
    David A. Fehr, Joanna E. Handzlik, Manu, Yen Lee Loh
  • Expression of Heat Shock Protein 70 Is Insufficient To Extend Drosophila melanogaster Longevity
    Chengfeng Xiao, Danna Hull, Shuang Qiu, Joanna Yeung, Jie Zheng, Taylor Barwell, R. Meldrum Robertson, Laurent Seroude
  • Marker-Trait Associations for Enhancing Agronomic Performance, Disease Resistance, and Grain Quality in Synthetic and Bread Wheat Accessions in Western Siberia
    Madhav Bhatta, Vladimir Shamanin, Sergey Shepelev, P. Stephen Baenziger, Violetta Pozherukova, Inna Pototskaya, Alexey Morgounov
  • Network-Based Functional Prediction Augments Genetic Association To Predict Candidate Genes for Histamine Hypersensitivity in Mice
    Anna L. Tyler, Abbas Raza, Dimitry N. Krementsov, Laure K. Case, Rui Huang, Runlin Z. Ma, Elizabeth P. Blankenhorn, Cory Teuscher, J. Matthew Mahoney
  • Machine Learning Enables High-Throughput Phenotyping for Analyses of the Genetic Architecture of Bulliform Cell Patterning in Maize
    Pengfei Qiao, Meng Lin, Miguel Vasquez, Susanne Matschi, James Chamness, Matheus Baseggio, Laurie G. Smith, Mert R. Sabuncu, Michael A. Gore, Michael J. Scanlon

Corrigendum

  • Corrigendum

Reviewer Index

  • G3 Reviewer Index 2019

Current Issue

G3: Genes|Genomes|Genetics: 9 (12)

Volume 9 Issue 12, December 2019

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