Investigations

• Realized Genome Sharing in Heritability Estimation Using Random Effects Models

  Bowen Wang, Elizabeth Thompson
• The Genetics and Genome-Wide Screening of Regrowth Loci, a Key Component of Perennialism in Zea diploperennis

  Anjun Ma, Yinjie Qiu, Tajbir Raihan, Bimal Paudel, Subha Dahal, Yongbin Zhuang, Aravind Galla, Donald Auger, Yang Yen
• Deciphering the Genetics of Major End-Use Quality Traits in Wheat

  Sepehr Mohajeri Naraghi, Senay Simsek, Ajay Kumar, S.M. Hisam Al Rabbi, Mohammed S. Alamri, Elias M. Elias, Mohamed Mergoum
• Imperfect Linkage Disequilibrium Generates Phantom Epistasis (& Perils of Big Data)

  Gustavo de los Campos, Daniel Alberto Sorensen, Miguel Angel Toro
• Unravelling the Complex Genetics of Karnal Bunt (Tilletia indica) Resistance in Common Wheat (Triticum aestivum) by Genetic Linkage and Genome-Wide Association Analyses

  Livinus Emebiri, Sukhwinder Singh, Mui-Keng Tan, Pawan K. Singh, Guillermo Fuentes-Dávila, Francis Ogbonnaya
• Gaussian-Distributed Codon Frequencies of Genomes

  Bohdan B. Khomtchouk, Wolfgang Nonner
• Isolation by Distance, Source-Sink Population Dynamics and Dispersal Facilitation by Trade Routes: Impact on Population Genetic Structure of a Stored Grain Pest

  Erick M. G. Cordeiro, James F. Campbell, Thomas Phillips, Eduard Akhunov
• Usefulness Criterion and Post-selection Parental Contributions in Multi-parental Crosses: Application to Polygenic Trait Introgression

  Antoine Allier, Laurence Moreau, Alain Charcosset, Simon Teyssèdre, Christina Lehermeier
• Locating and Characterizing a Transgene Integration Site by Nanopore Sequencing

  Peter K. Nicholls, Daniel W. Bellott, Ting-Jan Cho, Tatyana Pyntikova, David C. Page
• The Neurospora crassa Standard Oak Ridge Background Exhibits Atypically Efficient Meiotic Silencing by Unpaired DNA

  Dev Ashish Giri, Ajith V. Pankajam, Koodali T. Nishant, Durgadas P. Kasbekar
• Assessment of Genetic Differentiation and Linkage Disequilibrium in Solanum pimpinellifolium Using Genome-Wide High-Density SNP Markers

  Ya-Ping Lin, Chu-Yin Liu, Kai-Yi Chen
• Small RNA-Seq Analysis Reveals miRNA Expression Dynamics Across Tissues in the Malaria Vector, Anopheles gambiae

  William Bart Bryant, Mary Katherine Mills, Bradley JSC Olson, Kristin Michel
• Integrating Molecular Markers and Environmental Covariates To Interpret Genotype by Environment Interaction in Rice (Oryza sativa L.) Grown in Subtropical Areas

  Eliana Monteverde, Lucía Gutierrez, Pedro Blanco, Fernando Pérez de Vida, Juan E. Rosas, Victoria Bonnecarrère, Gastón Quero, Susan McCouch
• Variation in Filamentous Growth and Response to Quorum-Sensing Compounds in Environmental Isolates of Saccharomyces cerevisiae

  B. Adam Lenhart, Brianna Meeks, Helen A. Murphy
• New Deep Learning Genomic-Based Prediction Model for Multiple Traits with Binary, Ordinal, and Continuous Phenotypes

  Osval A. Montesinos-López, Javier Martín-Vallejo, José Crossa, Daniel Gianola, Carlos M. Hernández-Suárez, Abelardo Montesinos-López, Philomin Juliana, Ravi Singh
• Use of F2 Bulks in Training Sets for Genomic Prediction of Combining Ability and Hybrid Performance

  Frank Technow
• Cleaning Genotype Data from Diversity Outbred Mice

  Karl W. Broman, Daniel M. Gatti, Karen L. Svenson, Śaunak Sen, Gary A. Churchill
• Genetic and Molecular Analysis of Essential Genes in Centromeric Heterochromatin of the Left Arm of Chromosome 3 in Drosophila melanogaster

  Monika Syrzycka, Graham Hallson, Kathleen A. Fitzpatrick, Inho Kim, Shawn Cotsworth, Rob E. Hollebakken, Kevin Simonetto, Linda Yang, Stephanie Luongo, Kevin Beja, Alistair B. Coulthard, Arthur J. Hilliker, Donald A. Sinclair, Barry M. Honda
• Early Developmental Stress Affects Subsequent Gene Expression Response to an Acute Stress in Atlantic Salmon: An Approach for Creating Robust Fish for Aquaculture?

  Nicholas A. Robinson, Hanne Johnsen, Hooman Moghadam, Øivind Andersen, Helge Tveiten
• A Diallel of the Mouse Collaborative Cross Founders Reveals Strong Strain-Specific Maternal Effects on Litter Size

  John R. Shorter, Paul L. Maurizio, Timothy A. Bell, Ginger D. Shaw, Darla R. Miller, Terry J. Gooch, Jason S. Spence, Leonard McMillan, William Valdar, Fernando Pardo-Manuel de Villena
• An Ultra-Dense Haploid Genetic Map for Evaluating the Highly Fragmented Genome Assembly of Norway Spruce (Picea abies)

  Carolina Bernhardsson, Amaryllis Vidalis, Xi Wang, Douglas G. Scofield, Bastian Schiffthaler, John Baison, Nathaniel R. Street, M. Rosario García-Gil, Pär K. Ingvarsson
• Genomic Variants Among Threatened Acropora Corals

  Sheila. A. Kitchen, Aakrosh Ratan, Oscar C. Bedoya-Reina, Richard Burhans, Nicole D. Fogarty, Webb Miller, Iliana B. Baums
• Noncanonical Contributions of MutLγ to VDE-Initiated Crossovers During Saccharomyces cerevisiae Meiosis

  Anura Shodhan, Darpan Medhi, Michael Lichten
• Genetic Properties Responsible for the Transgressive Segregation of Days to Heading in Rice

  Yohei Koide, Shuntaro Sakaguchi, Takashi Uchiyama, Yuya Ota, Ayumi Tezuka, Atsushi J. Nagano, Seiya Ishiguro, Itsuro Takamure, Yuji Kishima
• Mapping Gene Markers for Apple Fruit Ring Rot Disease Resistance Using a Multi-omics Approach

  Fei Shen, Zhenyu Huang, Baoguo Zhang, Yi Wang, Xi Zhang, Ting Wu, Xuefeng Xu, Xinzhong Zhang, Zhenhai Han
• HSB-1 Inhibition and HSF-1 Overexpression Trigger Overlapping Transcriptional Changes To Promote Longevity in Caenorhabditis elegans

  Surojit Sural, Tzu-Chiao Lu, Seung Ah Jung, Ao-Lin Hsu
• Genotypic Frequencies at Equilibrium for Polysomic Inheritance Under Double-Reduction

  Kang Huang, Tongcheng Wang, Derek W. Dunn, Pei Zhang, Xiaoxiao Cao, Rucong Liu, Baoguo Li
• Determinants of QTL Mapping Power in the Realized Collaborative Cross

  Gregory R. Keele, Wesley L. Crouse, Samir N. P. Kelada, William Valdar
• Long-Term Combinatorial Exposure to Trichloroethylene and Inorganic Arsenic in Genetically Heterogeneous Mice Results in Renal Tubular Damage and Cancer-Associated Molecular Changes

  Amie Perry, Rachel M. Lynch, Ivan Rusyn, David W. Threadgill
• Identification of a Rat Mammary Tumor Risk Locus That Is Syntenic with the Commonly Amplified 8q12.1 and 8q22.1 Regions in Human Breast Cancer Patients

  Cody Plasterer, Shirng-Wern Tsaih, Angela Lemke, Rebecca Schilling, Melinda Dwinell, Andrea Rau, Paul Auer, Hallgeir Rui, Michael J. Flister
• Genetic Dissection of Resistance to the Three Fungal Plant Pathogens Blumeria graminis, Zymoseptoria tritici, and Pyrenophora tritici-repentis Using a Multiparental Winter Wheat Population

  Melanie Stadlmeier, Lise Nistrup Jørgensen, Beatrice Corsi, James Cockram, Lorenz Hartl, Volker Mohler
• High-Efficiency CRISPR/Cas9-Mediated Gene Editing in Honeybee (Apis mellifera) Embryos

  Xiao Fen Hu, Bo Zhang, Chun Hua Liao, Zhi Jiang Zeng
• Assessing the Architecture of Drosophila mojavensis Locomotor Evolution with Bulk Segregant Analysis

  Kyle M. Benowitz, Joshua M. Coleman, Luciano M. Matzkin
• Isolation of Fission Yeast Condensin Temperature-Sensitive Mutants with Single Amino Acid Substitutions Targeted to Hinge Domain

  Xingya Xu, Mitsuhiro Yanagida