## Supporting Information for Bersabe *et al.*, 2015

**Files in this Data Supplement:**

- Supporting Information - This file contains all supporting figures and tables. (.pdf, 4,688 KB)
- Figure S17 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding inbreeding expected from the census_{t}/H_{0}*N*(f_{N}), represented for two different deleterious effects (*s*) with partially recessive gene action (*h*= 0.2), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 261 KB) - Figure S18 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding inbreeding expected from the census_{t}/H_{0}*N*(*f*), represented for two different deleterious effects (_{N}*s*) with additive gene action (*h*= 0.5), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 267 KB) - Figure S1 -
Per-generation average inbreeding obtained from pedigrees in the lines (
*f*) plotted against the corresponding inbreeding expected from the census_{p}*N*(*f*), represented for two different deleterious effects (_{N}*s*) with completely recessive gene action (*h*= 0), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 290 KB) - Figure S19 -
Per-generation average of additive variance in the lines (
*V*) plotted against the corresponding pedigree inbreeding (_{a}*f*), represented for two different deleterious effects (_{p}*s*) with completely recessive gene action (*h*= 0), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 428 KB) - Figure S20 -
Per-generation average of additive variance in the lines (
*V*) plotted against the corresponding pedigree inbreeding (_{a}*f*), represented for two different deleterious effects (_{p}*s*) with partially recessive gene action (*h*= 0.2), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 322 KB) - Figure S21 -
Per-generation average of additive variance in the lines (
*V*) plotted against the corresponding pedigree inbreeding (_{a}*f*), represented for two different deleterious effects (_{p}*s*) with additive gene action (*h*= 0.5), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 296 KB) - Figure S2 -
Per-generation average inbreeding obtained from pedigrees in the lines (
*f*) plotted against the corresponding inbreeding expected from the census_{p}*N*(*f*), represented for two different deleterious effects (_{N}*s*) with partially recessive gene action (*h*= 0.2), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 243 KB) - Figure S3 -
Per-generation average inbreeding obtained from pedigrees in the lines (
*f*) plotted against the corresponding inbreeding expected from the census_{p}*N*(*f*), represented for two different deleterious effects (_{N}*s*) with additive gene action (*h*= 0.5), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 256 KB) - Figure S4 -
Per-generation average inbreeding obtained from pedigrees in the lines (
*f*) plotted against the corresponding inbreeding expected taking into account the observed variance of gametic contributions (_{p}*f*), represented for two different deleterious effects (_{Vk}*s*) with completely recessive gene action (*h*= 0), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 301 KB) - Figure S5 -
Per-generation average inbreeding obtained from pedigrees in the lines (
*f*) plotted against the corresponding inbreeding expected taking into account the observed variance of gametic contributions (_{p}*f*), represented for two different deleterious effects (_{Vk}*s*) with partially recessive gene action (*h*= 0.2), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 243 KB) - Figure S9 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding inbreeding expected taking into account the observed variance of gametic contributions (_{t}/H_{0}*f*), represented for two different deleterious effects (_{Vk}*s*) with additive gene action (*h*= 0.5), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 258 KB) - Figure S6 -
Per-generation average inbreeding obtained from pedigrees in the lines (
*f*) plotted against the corresponding inbreeding expected taking into account the observed variance of gametic contributions (_{p}*f*), represented for two different deleterious effects (_{Vk}*s*) with additive gene action (*h*= 0.5), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 247 KB) - Figure S7 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding inbreeding expected taking into account the observed variance of gametic contributions (_{t}/H_{0}*f*), represented for two different deleterious effects (_{Vk}*s*) with completely recessive gene action (*h*= 0), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 317 KB) - Figure S8 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding inbreeding expected taking into account the observed variance of gametic contributions (_{t}/H_{0,}*f*), represented for two different deleterious effects (_{Vk}*s*) with partially recessive gene action (*h*= 0.2), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 261 KB) - Table S1 - Genetic parameters at the base populations. (.pdf, 177 KB)
- Figure S10 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding pedigree inbreeding (_{t}/H_{0}*f*), represented for two different deleterious effects (_{p}*s*) with completely recessive gene action (*h*= 0), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 286 KB) - Figure S11 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding pedigree inbreeding (_{t}/H_{0}*f*), represented for two different deleterious effects (_{p}*s*) with partially recessive gene action (*h*= 0.2), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 249 KB) - Figure S12 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding pedigree inbreeding (_{t}/H_{0}*f*), represented for two different deleterious effects (_{p}*s*) with additive gene action (*h*= 0.5), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 246 KB) - Figure S13 -
Relative neutral genetic diversity expected in the lines on the basis of the observed
variance of gametic contributions (
*H*) plotted against the corresponding inbreeding expected from the census_{t}(f_{Vk})/H_{0}*N*(*f*), represented for two different deleterious effects (_{N}*s*) with completely recessive gene action (*h*= 0), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 312 KB) - Figure S14 -
Relative neutral genetic diversity expected in the lines on the basis of the observed
variance of gametic contributions (
*H*) plotted against the corresponding inbreeding expected from the census_{t}(f_{Vk})/H_{0}*N*(*f*), represented for two different deleterious effects (_{N}*s*) with partially recessive gene action (*h*= 0.2), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 241 KB) - Figure S15 -
Relative neutral genetic diversity expected in the lines on the basis of the observed
variance of gametic contributions (
*H*) plotted against the corresponding inbreeding expected from the census_{t}(f_{Vk})/H_{0}*N*(*f*), represented for two different deleterious effects (_{N}*s*) with additive gene action (*h*= 0.5), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 242 KB) - Figure S16 -
Per-generation average of relative neutral genetic diversity in the lines (
*H*) plotted against the corresponding inbreeding expected from the census_{t}/H_{0}*N*(*f*), represented for two different deleterious effects (_{N}*s*) with completely recessive gene action (*h*= 0), and assuming free recombination or a genome length of*L*Morgans. (.pdf, 296 KB)