Supplement to The Use of RelocaTE and Unassembled Short Reads to Produce High-Resolution Snapshots of Transposable Element Generated Diversity in Rice | G3: Genes | Genomes | Genetics
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The Use of RelocaTE and Unassembled Short Reads to Produce High-Resolution Snapshots of Transposable Element Generated Diversity in Rice

Sofia M.C. Robb, Lu Lu, Elizabeth Valencia, James M. Burnette, Yutaka Okumoto, Susan R. Wessler and Jason E. Stajich
G3: Genes, Genomes, Genetics April 2013, g3.112.005348; DOI: https://doi.org/10.1534/g3.112.005348

Supporting Information for Robb et al., 2013

Files in this Data Supplement:

  • Supporting Information - Files S1-S2 and Tables S1-S4 (PDF, 256 KB)
  • Table S1 - Somatic excision event classification of non-reference insertions in A123-0 (PDF, 87 KB)
  • Table S2 - Excision events with footprints in A123-0 (PDF, 86 KB)
  • Table S3 - PCR Primers for non-reference insertion validation (PDF, 92 KB)
  • Table S4 - TEs other than mPing used for a RelocaTE search in A123-2 (PDF, 98 KB)
  • File S1 - RelocaTE output file (.txt, 239 KB)
  • File S2 - RelocaTE source code v1.0.1 (.zip, 30 MB)

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