Supplemental Material for Fu, Peterson, and Dong, 2016

Files in this Data Supplement:

• Figure S1 - The empirical genome coverages (%) obtained for three restriction enzyme combinations (PM=PstI+MspI; AB=AvaII+BfaI; HH=HinfI+HpyCH4IV) in 12 plant species in relations to their genome sizes. (.pdf, 13 KB)
• Table S1 - List of 60 restriction enzymes used in this study, along with their catalogue numbers and basic features: recognition site and length, reported methylation sensitivity, active temperature (Temp) and unit cost (¢/unit). (.pdf, 108 KB)
• Table S2 - List of 22 species (8 plant, 13 animal and 1 fungus) and their genome sequence information obtained from NCBI database for in silico analysis of restriction enzyme digestions. (.pdf, 24 KB)
• Table S3 - The in silico genome coverages (IgC; %) of 22 species with sequenced genomes (8 plant, 13 animals and 1 fungus) by DNA fragments of different ends and lengths (100-600bp) obtained from in silico digestions by 70 restriction enzyme pairs, including the GBS reference pair PstI+MspI. (.pdf, 117 KB)
• File S1 - Supplemental file for the software IgCoverage.rar and "Getting Started with IgCoverage.pdf." (.rar, 320 KB)