genomic prediction

Genomic Prediction for Winter Survival of Lowland Switchgrass in the Northern USA
Hari P. Poudel, Millicent D. Sanciangco, Shawn M. Kaeppler, C. Robin Buell, Michael D. Casler

G3: Genes, Genomes, Genetics April 2019 g3.400094.2019; https://doi.org/10.1534/g3.119.400094
Hyperspectral Reflectance-Derived Relationship Matrices for Genomic Prediction of Grain Yield in Wheat
Margaret R. Krause, Lorena González-Pérez, José Crossa, Paulino Pérez-Rodríguez, Osval Montesinos-López, Ravi P. Singh, Susanne Dreisigacker, Jesse Poland, Jessica Rutkoski, Mark Sorrells, Michael A. Gore, Suchismita Mondal

G3: Genes, Genomes, Genetics April 2019 9: 1231-1247; https://doi.org/10.1534/g3.118.200856
Genomic Prediction of Autotetraploids; Influence of Relationship Matrices, Allele Dosage, and Continuous Genotyping Calls in Phenotype Prediction
Ivone de Bem Oliveira, Marcio F. R. Resende, Luis Felipe V. Ferrão, Rodrigo R. Amadeu, Jeffrey B. Endelman, Matias Kirst, Alexandre S. G. Coelho, Patricio R. Munoz

G3: Genes, Genomes, Genetics April 2019 9: 1189-1198; https://doi.org/10.1534/g3.119.400059
Lost in Translation: On the Problem of Data Coding in Penalized Whole Genome Regression with Interactions

Johannes W. R. Martini, Francisco Rosales, Ngoc-Thuy Ha, Johannes Heise, Valentin Wimmer, Thomas Kneib

G3: Genes, Genomes, Genetics April 2019 9: 1117-1129; https://doi.org/10.1534/g3.118.200961
Integrating Molecular Markers and Environmental Covariates To Interpret Genotype by Environment Interaction in Rice (Oryza sativa L.) Grown in Subtropical Areas
Eliana Monteverde, Lucía Gutierrez, Pedro Blanco, Fernando Pérez de Vida, Juan E. Rosas, Victoria Bonnecarrère, Gastón Quero, Susan McCouch

G3: Genes, Genomes, Genetics March 2019 g3.400064.2019; https://doi.org/10.1534/g3.119.400064
Use of F2 Bulks in Training Sets for Genomic Prediction of Combining Ability and Hybrid Performance
Frank Technow

G3: Genes, Genomes, Genetics March 2019 g3.200994.2018; https://doi.org/10.1534/g3.118.200994
Extensions of BLUP Models for Genomic Prediction in Heterogeneous Populations: Application in a Diverse Switchgrass Sample
Guillaume P. Ramstein, Michael D. Casler

G3: Genes, Genomes, Genetics March 2019 9: 789-805; https://doi.org/10.1534/g3.118.200969
Prediction of Subgenome Additive and Interaction Effects in Allohexaploid Wheat
Nicholas Santantonio, Jean-Luc Jannink, Mark Sorrells

G3: Genes, Genomes, Genetics March 2019 9: 685-698; https://doi.org/10.1534/g3.118.200613
A Benchmarking Between Deep Learning, Support Vector Machine and Bayesian Threshold Best Linear Unbiased Prediction for Predicting Ordinal Traits in Plant Breeding
Osval A. Montesinos-López, Javier Martín-Vallejo, José Crossa, Daniel Gianola, Carlos M. Hernández-Suárez, Abelardo Montesinos-López, Philomin Juliana, Ravi Singh

G3: Genes, Genomes, Genetics February 2019 9: 601-618; https://doi.org/10.1534/g3.118.200998
pSBVB: A Versatile Simulation Tool To Evaluate Genomic Selection in Polyploid Species
María L. Zingaretti, Amparo Monfort, Miguel Pérez-Enciso

G3: Genes, Genomes, Genetics February 2019 9: 327-334; https://doi.org/10.1534/g3.118.200942

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