Table 4 The summary of KEGG pathways with the significantly change of methylated cytosine counts in fsv1 and Gui99
Top 10 of Hyper-methylated PathwaysTop 10 of Hypo-methylated Pathways
Biosynthesis of secondary metabolites (248)SNARE interactions in vesicular transport (−223)
Pyrimidine metabolism (121)Metabolic pathways (−203)
Butanoate metabolism (96)Plant–pathogen interaction (−197)
Ribosome (85)Protein processing in endoplasmic reticulum (−179)
Ubiquinone and other terpenoid-quinone biosynthesis (82)Glycerophospholipid metabolism (−145)
Carbon fixation in photosynthetic organisms (80)Glycerolipid metabolism (−118)
Pantothenate and CoA biosynthesis (77)RNA transport (−118)
C5-Branched dibasic acid metabolism (77)Homologous recombination (−117)
Starch and sucrose metabolism (68)Nitrogen metabolism (−114)
Glycolysis/gluconeogenesis (68)Phenylalanine metabolism (−112)
  • Numbers in parentheses represented the total methylated cytosine counts of the DMGs identified in the pathway in fsv1 minus that in Gui99.