Table 1 Mapping statistics for sea cucumber RNA types from Illumina sequencing reads
DO2_1DO2_2DO2_3
libTotal% of Totaluniq% of uniqTotal% of Totaluniq% of uniqTotal% of Totaluniq% of uniq
All clean reads9,727,619100.0000560,047100.00009,914,296100.0000404,613100.000011,004,979100.0000143,712100.0000
miRNA539,4205.5452990.01771,063,95310.73151800.04452,841,85825.82342990.2081
rRNA573,5725.896310,6771.9064709,3587.154910,0942.4947489,0004.44344,8443.3706
tRNA31,5580.32441,1070.197744,2650.44651,3630.336951,5740.46869260.6443
snoRNA1,1460.0118790.01411,2190.01231020.02521,5720.0143910.0633
snRNA139,1911.43094690.0837120,4381.21485110.1263154,7511.40623730.2595
novel miRNA890.0009110.00205360.0054850.02103,1640.02881790.1246
Unann8,442,64386.7904547,60597.77847,974,52780.4346392,27896.95147,463,06067.8153137,00095.3295
DO4_1DO4_2DO4_3
libTotal% of Totaluniq% of uniqTotal% of Totaluniq% of uniqTotal% of Totaluniq% of uniq
All clean reads11,492,366100.0000221,088100.000010,058,997100.0000157,861100.000011,151,849100.0000100,967100.0000
miRNA10,541,64491.72741420.06428,404,67883.55381210.07669,326,74583.63411850.1832
rRNA26,7320.23261,5660.708336,7440.36532,3961.517837,3100.33462,4382.4147
tRNA6,4740.05633030.13707,6430.07604720.29907,6080.06826290.6230
snoRNA3270.0028350.01585330.0053190.01202020.0018220.0218
snRNA4130.0036480.02172230.0022320.02033480.0031390.0386
novel miRNA7970.0069390.01762350.0023110.00701680.0015210.0208
Unann915,9797.9703218,95599.03521,608,94115.9950154,81098.06731,779,46815.956797,63396.6979
DO8_1DO8_2DO8_3
libTotal% of Totaluniq% of uniqTotal% of Totaluniq% of uniqTotal% of Totaluniq% of uniq
All clean reads11,169,604100.0000156,487100.000011,480,552100.0000134,370100.000010,544,806100.0000180,413100.0000
miRNA10,182,91991.16631030.06589,740,81684.84621180.08788,056,43276.40191170.0649
rRNA17,1720.15371,0550.674214,9820.13051,0320.768047,1020.44673,0361.6828
tRNA5,6240.05043390.21666,6730.05814290.319310,7800.10227660.4246
snoRNA4570.0041140.00893080.0027140.01044540.0043240.0133
snRNA2260.0020310.01981960.0017190.01411930.0018280.0155
novel miRNA580.000530.0019550.000540.0030740.000780.0044
Unann963,1488.6229154,94299.01271,717,52214.9603132,75498.79742,429,77123.0423176,43497.7945
  • Lib, Library; uniq, unique data; rRNA, ribosomal RNA; tRNA, transfer RNA; snoRNA, small nuclear RNA; snRNA, small nucleolar RNA; Unann, unannotated data.