Table 2 Assembly statistics for contiguous sequences at each stage of genome assembly
Assembly Statistics
MethodContigsTotal bpN50Unassigned bp (N)
Velvet111,815,859400,7331,661
SSpace11,821,5931,821,5931,741
GapFiller11,821,6321,821,63256
Sanger Seq11,821,5811,821,5816
  • Contigs, number of contiguous sequences; Total bp, total number of base pairs assembled; N50, contig length when the sum of contigs is >50% of total assembly; Unassigned bp (N), number of unassigned base pairs; Seq, sequencing.