Table 8 Networks identified by BlocBuster using a threshold of CCC ≥ 0.84 on the HapMap samples using 571 SNPs
NetworkGeneSNP IDAlleleChrPositionGene Location
84_1SLC45A2rs183671*T533964210Intron 2
SLC45A2rs28777C533958959Intron 3
SLC45A2rs35389G533954880Intron 3
SLC45A2rs16891982*C533951693Exon 5 (Phe374Leu)
SLC45A2rs35397*G533951116Intron 5
SLC45A2rs35395*T533948589Intron 5
SLC45A2rs35407A5339465713′UTR
84_2SLC45A2rs183671*G533964210Intron 2
SLC45A2rs28777A533958959Intron 3
SLC45A2rs35389A533954880Intron 3
SLC45A2rs16891982*G533951693Exon 5 (Phe374Leu)
SLC45A2rs35397*T533951116Intron 5
SLC45A2rs35395*C533948589Intron 5
SLC45A2rs35407G5339465713′UTR
SLC24A5rs12440301G15483899245′UTR
SLC24A5rs12441154*C15483909565′UTR
SLC24A5rs1834640A15483921655′UTR
SLC24A5rs2675345A15484001995′UTR
SLC24A5rs1426654A1548426484Exon 3 (Thr111Ala)
84_3SLC45A2rs35391C533955673Intron 3
SLC45A2rs35390*A533955326Intron 3
SLC45A2rs250417*C533952378Intron 4
84_4VDRrs987849*A1248254676Intron 3
VDRrs11168268A1248251812Intron 3
84_5VDRrs4760655*A1248294131Promoter (intron 1a)
VDRrs10783219*A1246581755Promoter (intron 1a)
VDRrs7132324C1246593576Promoter
VDRrs10783219*A1246581755Promoter (intron 1a)
VDRrs7132324C1246593576Promoter
84_6SLC24A5rs1559857G15483968085′UTR
SLC24A5rs2675346C15484118215′UTR
SLC24A5rs2433354C1548414969Intron 2
SLC24A5rs2675347A1548418645Intron 2
SLC24A5rs2555364*G1548419386Intron 2
SLC24A5rs2675348A1548420744Intron 2
84_7SLC24A5rs2675345G15484001995′UTR
SLC24A5rs2470102G15484333494Intron 8
  • SNP positions are indicated according to Genome Build 37.1. SNPs with an asterisk were excluded from the reduced networks used to test for latitudinal associations. SNP, single nucleotide polymorphism; Chr, chromosome; Phe, phenylalanine; Leu, leucine; UTR, untranslated region; Thr, threonine; Ala, alanine.