Table 4

Homologies between Chinook salmon and rainbow trout chromosome arms and number of RAD markers supporting the homologies in this study

Chinook chromosome (current study, Phillips et al. 2013)Chinook linkage group (Naish et al. 2013)Rainbow trout Chromosome (Phillips et al. 2006)Rainbow trout linkage group (Miller et al. 2012)Number of markers supporting homology
Ots01pCk13Omy04pWS017
Ots01qOmy23WS276
Ots02p,qCk12Omy17p,qWS2313
Ots03p,qCk05Omy03p,qWS067
Ots04p,qCk08Omy06p,qWS1315
Ots05pCk11Omy08pWS055
Ots05qOmy05qWS0318
Ots06p,qCk17Omy01p,qWS2017
Ots07p,qCk16Omy07p,qWS255
Ots08p,qCk14Omy25WS2419
Ots09p,qCk02Omy12p,qWS2113
Ots10pCk20Omy09pWS042
Ots10qOmy08qWS058
Ots11p,qCk15Omy19p,qWS227
Ots12pCk18Omy11p+qWS078
Ots12qOmy26WS282
Ots13pCk07Omy18qWS194
Ots13qOmy27WS278
Ots14pCk10Omy18pØ0
Ots14qOmy24WS1711
Ots15p,qCk23Omy21p,qWS269
Ots16pCk04Omy11pWS073
Ots16qOmy09qWS043
Ots17Ck01Omy15qWS128
Ots18Ck33Omy04qWS016
Ots19Ck22Omy02qWS1812
Ots20Ck28Omy05pWS0311
Ots21Ck09Omy14qWS106
Ots22Ck34Omy16qWS086
Ots23Ck25Omy02pWS182
Ots24Ck27Omy16pWS088
Ots25Ck06Omy20p+qWS156
Ots26Ck21Omy22WS029
Ots27Ck31Omy13qWS292
Ots28Ck24Omy28WS099
Ots29Ck03Omy15pWS125
Ots30Ck29Omy10pWS1411
Ots31Ck26Omy14pWS106
Ots32Ck30Omy13pWS294
Ots33Ck19OmySexWS117
Ots34Ck32Omy10qWS143
  • RAD, restriction-site associated DNA.