Table 2 SSRs in non-redundant white clover ESTs and designed EST-SSR primers
SSR PatternSSR Numbers in Non-redundant White Clover ESTsFrequency (%)Designed EST-SSR Primers
Mismatch 0Mismatch 1Mismatch 2Total
AG21116.6730194493
AT221.74731525
AC80.63461121
GC00.000000
AAC18214.384964139252
AAG17914.143590246371
GGT17013.432763157247
ATC1138.933049151230
AAT866.79172166104
AGC796.2483390131
GGA362.84103489133
GGC191.50284757
ACT161.265122138
ACG40.32052126
AATG262.053121934
AAAT231.824133047
AAAG201.58354452
AGTG80.630000
ATAG80.630000
AATT80.63321722
ATAC50.390000
AACC40.320000
AAAC40.32093443
AACT30.240000
Other tetra-nucleotide repeats322.53483547
Total126610024145612761973