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G3: Genes | Genomes | Genetics

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January 2017 Table of Contents

Investigations

  • The CgHaa1-Regulon Mediates Response and Tolerance to Acetic Acid Stress in the Human Pathogen Candida glabrata
    Ruben T. Bernardo, Diana V. Cunha, Can Wang, Leonel Pereira, Sónia Silva, Sara B. Salazar, Markus S. Schröder, Michiyo Okamoto, Azusa Takahashi-Nakaguchi, Hiroji Chibana, Toshihiro Aoyama, Isabel Sá-Correia, Joana Azeredo, Geraldine Butler, Nuno Pereira Mira
    G3: Genes, Genomes, Genetics January 2017 7: 1-18; https://doi.org/10.1534/g3.116.034660
  • Using Next-Generation Sequencing for DNA Barcoding: Capturing Allelic Variation in ITS2
    Jana Batovska, Noel O. I. Cogan, Stacey E. Lynch, Mark J. Blacket
    G3: Genes, Genomes, Genetics January 2017 7: 19-29; https://doi.org/10.1534/g3.116.036145
  • Small RNA Sequencing in Cells and Exosomes Identifies eQTLs and 14q32 as a Region of Active Export
    Emily K. Tsang, Nathan S. Abell, Xin Li, Vanessa Anaya, Konrad J. Karczewski, David A. Knowles, Raymond G. Sierra, Kevin S. Smith, Stephen B. Montgomery
    G3: Genes, Genomes, Genetics January 2017 7: 31-39; https://doi.org/10.1534/g3.116.036137
  • Bayesian Genomic Prediction with Genotype × Environment Interaction Kernel Models
    Jaime Cuevas, José Crossa, Osval A. Montesinos-López, Juan Burgueño, Paulino Pérez-Rodríguez, Gustavo de los Campos
    G3: Genes, Genomes, Genetics January 2017 7: 41-53; https://doi.org/10.1534/g3.116.035584
  • Assortative Mating and Linkage Disequilibrium
    Philip W. Hedrick
    G3: Genes, Genomes, Genetics January 2017 7: 55-62; https://doi.org/10.1534/g3.116.034967
  • The Phenotypic Plasticity of Duplicated Genes in Saccharomyces cerevisiae and the Origin of Adaptations
    Florian Mattenberger, Beatriz Sabater-Muñoz, Christina Toft, Mario A. Fares
    G3: Genes, Genomes, Genetics January 2017 7: 63-75; https://doi.org/10.1534/g3.116.035329
  • Cytogenetic and Molecular Characterization of B-Genome Introgression Lines of Brassica napus L.
    Inderpreet Dhaliwal, Annaliese S. Mason, Shashi Banga, Sakshi Bharti, Beerpal Kaur, Allison Mary Gurung, Phillip Anthony Salisbury, Jacqueline Batley, Surinder Singh Banga
    G3: Genes, Genomes, Genetics January 2017 7: 77-86; https://doi.org/10.1534/g3.116.036442
  • Efficient Screening of CRISPR/Cas9-Induced Events in Drosophila Using a Co-CRISPR Strategy
    Nanci S. Kane, Mehul Vora, Krishna J. Varre, Richard W. Padgett
    G3: Genes, Genomes, Genetics January 2017 7: 87-93; https://doi.org/10.1534/g3.116.036723
  • Candida albicans Is Resistant to Polyglutamine Aggregation and Toxicity
    Michelle D. Leach, TaeHyung Kim, Sonja E. DiGregorio, Cathy Collins, Zhaolei Zhang, Martin L. Duennwald, Leah E. Cowen
    G3: Genes, Genomes, Genetics January 2017 7: 95-108; https://doi.org/10.1534/g3.116.035675
  • A New Chicken Genome Assembly Provides Insight into Avian Genome Structure
    Wesley C. Warren, LaDeana W. Hillier, Chad Tomlinson, Patrick Minx, Milinn Kremitzki, Tina Graves, Chris Markovic, Nathan Bouk, Kim D. Pruitt, Francoise Thibaud-Nissen, Valerie Schneider, Tamer A. Mansour, C. Titus Brown, Aleksey Zimin, Rachel Hawken, Mitch Abrahamsen, Alexis B. Pyrkosz, Mireille Morisson, Valerie Fillon, Alain Vignal, William Chow, Kerstin Howe, Janet E. Fulton, Marcia M. Miller, Peter Lovell, Claudio V. Mello, Morgan Wirthlin, Andrew S. Mason, Richard Kuo, David W. Burt, Jerry B. Dodgson, Hans H. Cheng
    G3: Genes, Genomes, Genetics January 2017 7: 109-117; https://doi.org/10.1534/g3.116.035923
  • Imputation-Based Fine-Mapping Suggests That Most QTL in an Outbred Chicken Advanced Intercross Body Weight Line Are Due to Multiple, Linked Loci
    Monika Brandt, Muhammad Ahsan, Christa F. Honaker, Paul B. Siegel, Örjan Carlborg
    G3: Genes, Genomes, Genetics January 2017 7: 119-128; https://doi.org/10.1534/g3.116.036012
  • The Neurospora Transcription Factor ADV-1 Transduces Light Signals and Temporal Information to Control Rhythmic Expression of Genes Involved in Cell Fusion
    Rigzin Dekhang, Cheng Wu, Kristina M. Smith, Teresa M. Lamb, Matthew Peterson, Erin L. Bredeweg, Oneida Ibarra, Jillian M. Emerson, Nirmala Karunarathna, Anna Lyubetskaya, Elham Azizi, Jennifer M. Hurley, Jay C. Dunlap, James E. Galagan, Michael Freitag, Matthew S. Sachs, Deborah Bell-Pedersen
    G3: Genes, Genomes, Genetics January 2017 7: 129-142; https://doi.org/10.1534/g3.116.034298
  • iSeq: A New Double-Barcode Method for Detecting Dynamic Genetic Interactions in Yeast
    Mia Jaffe, Gavin Sherlock, Sasha F. Levy
    G3: Genes, Genomes, Genetics January 2017 7: 143-153; https://doi.org/10.1534/g3.116.034207
  • The Physical Genome Mapping of Anopheles albimanus Corrected Scaffold Misassemblies and Identified Interarm Rearrangements in Genus Anopheles
    Gleb N. Artemov, Ashley N. Peery, Xiaofang Jiang, Zhijian Tu, Vladimir N. Stegniy, Maria V. Sharakhova, Igor V. Sharakhov
    G3: Genes, Genomes, Genetics January 2017 7: 155-164; https://doi.org/10.1534/g3.116.034959
  • Regulatory Architecture of Gene Expression Variation in the Threespine Stickleback Gasterosteus aculeatus
    Victoria L. Pritchard, Heidi M. Viitaniemi, R. J. Scott McCairns, Juha Merilä, Mikko Nikinmaa, Craig R. Primmer, Erica H. Leder
    G3: Genes, Genomes, Genetics January 2017 7: 165-178; https://doi.org/10.1534/g3.116.033241
  • Cfs1p, a Novel Membrane Protein in the PQ-Loop Family, Is Involved in Phospholipid Flippase Functions in Yeast
    Takaharu Yamamoto, Konomi Fujimura-Kamada, Eno Shioji, Risa Suzuki, Kazuma Tanaka
    G3: Genes, Genomes, Genetics January 2017 7: 179-192; https://doi.org/10.1534/g3.116.035238
  • CRISPR/Cas9-Induced Double-Strand Break Repair in Arabidopsis Nonhomologous End-Joining Mutants
    Hexi Shen, Gary D. Strunks, Bart J. P. M. Klemann, Paul J. J. Hooykaas, Sylvia de Pater
    G3: Genes, Genomes, Genetics January 2017 7: 193-202; https://doi.org/10.1534/g3.116.035204
  • Analysis of Ribosome-Associated mRNAs in Rice Reveals the Importance of Transcript Size and GC Content in Translation
    Dongyan Zhao, John P. Hamilton, Michael Hardigan, Dongmei Yin, Tao He, Brieanne Vaillancourt, Mauricio Reynoso, Germain Pauluzzi, Scott Funkhouser, Yuehua Cui, Julia Bailey-Serres, Jiming Jiang, C. Robin Buell, Ning Jiang
    G3: Genes, Genomes, Genetics January 2017 7: 203-219; https://doi.org/10.1534/g3.116.036020
  • Time-Course Analysis of Gene Expression During the Saccharomyces cerevisiae Hypoxic Response
    Nasrine Bendjilali, Samuel MacLeon, Gurmannat Kalra, Stephen D. Willis, A. K. M. Nawshad Hossian, Erica Avery, Olivia Wojtowicz, Mark J. Hickman
    G3: Genes, Genomes, Genetics January 2017 7: 221-231; https://doi.org/10.1534/g3.116.034991
  • Dissecting Gene Expression Changes Accompanying a Ploidy-Based Phenotypic Switch
    Gareth A. Cromie, Zhihao Tan, Michelle Hays, Eric W. Jeffery, Aimée M. Dudley
    G3: Genes, Genomes, Genetics January 2017 7: 233-246; https://doi.org/10.1534/g3.116.036160
  • Multiplex shRNA Screening of Germ Cell Development by in Vivo Transfection of Mouse Testis
    Nicholas R. Y. Ho, Abul R. Usmani, Yan Yin, Liang Ma, Donald F. Conrad
    G3: Genes, Genomes, Genetics January 2017 7: 247-255; https://doi.org/10.1534/g3.116.036087
  • Caenorhabditis elegans DAF-2 as a Model for Human Insulin Receptoropathies
    David A. Bulger, Tetsunari Fukushige, Sijung Yun, Robert K. Semple, John A. Hanover, Michael W. Krause
    G3: Genes, Genomes, Genetics January 2017 7: 257-268; https://doi.org/10.1534/g3.116.037184
  • First in Vivo Batrachochytrium dendrobatidis Transcriptomes Reveal Mechanisms of Host Exploitation, Host-Specific Gene Expression, and Expressed Genotype Shifts
    Amy R. Ellison, Graziella V. DiRenzo, Caitlin A. McDonald, Karen R. Lips, Kelly R. Zamudio
    G3: Genes, Genomes, Genetics January 2017 7: 269-278; https://doi.org/10.1534/g3.116.035873
  • One-Cell Doubling Evaluation by Living Arrays of Yeast, ODELAY!
    Thurston Herricks, David J. Dilworth, Fred D. Mast, Song Li, Jennifer J. Smith, Alexander V. Ratushny, John D. Aitchison
    G3: Genes, Genomes, Genetics January 2017 7: 279-288; https://doi.org/10.1534/g3.116.037044
  • Correlations of Genotype with Climate Parameters Suggest Caenorhabditis elegans Niche Adaptations
    Kathryn S. Evans, Yuehui Zhao, Shannon C. Brady, Lijiang Long, Patrick T. McGrath, Erik C. Andersen
    G3: Genes, Genomes, Genetics January 2017 7: 289-298; https://doi.org/10.1534/g3.116.035162
  • Genotyping-by-Sequencing-Based Investigation of the Genetic Architecture Responsible for a ∼Sevenfold Increase in Soybean Seed Stearic Acid
    Crystal B. Heim, Jason D. Gillman
    G3: Genes, Genomes, Genetics January 2017 7: 299-308; https://doi.org/10.1534/g3.116.035741

Mutant Screen Report

  • Identification of Genes Mediating Drosophila Follicle Cell Progenitor Differentiation by Screening for Modifiers of GAL4::UAS Variegation
    Ming-Chia Lee, Andrew D. Skora, Allan C. Spradling
    G3: Genes, Genomes, Genetics January 2017 7: 309-318; https://doi.org/10.1534/g3.116.036038

Corrigendum

  • Corrigendum
    G3: Genes, Genomes, Genetics January 2017 7: 319; https://doi.org/10.1534/g3.116.037358
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PUBLICATION INFORMATION

Volume 7 Issue 1, January 2017

G3: Genes|Genomes|Genetics: 7 (1)
  • Table of Contents (PDF)
  • Cover (PDF)
  • About the Cover
  • Index By Author
  • Editorial Board (PDF)
  • Most Read
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  • Anterior Pituitary Transcriptome Suggests Differences in ACTH Release in Tame and Aggressive Foxes
  • Reference Quality Genome Assemblies of Three Parastagonospora nodorum Isolates Differing in Virulence on Wheat
  • The Molecular and Genetic Characterization of Second Chromosome Balancers in Drosophila melanogaster
  • Multiple Origin but Single Domestication Led to Oryza sativa
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  • Investigations
  • Mutant Screen Report
  • Corrigendum

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