March 2013 Table of Contents

Investigations

• Strain Specific Genotype−Environment Interactions and Evolutionary Potential for Body Mass in Brook Charr (Salvelinus fontinalis)

  Amélie Crespel, Louis Bernatchez, Céline Audet, Dany Garant

  G3: Genes, Genomes, Genetics March 2013 3: 379-386; https://doi.org/10.1534/g3.112.005017
• Accurate Identification and Analysis of Human mRNA Isoforms Using Deep Long Read Sequencing

  Hagen Tilgner, Debasish Raha, Lukas Habegger, Mohammed Mohiuddin, Mark Gerstein, Michael Snyder

  G3: Genes, Genomes, Genetics March 2013 3: 387-397; https://doi.org/10.1534/g3.112.004812
• On the Mutational Topology of the Bacterial Genome

  Patricia L. Foster, Andrew J. Hanson, Heewook Lee, Ellen M. Popodi, Haixu Tang

  G3: Genes, Genomes, Genetics March 2013 3: 399-407; https://doi.org/10.1534/g3.112.005355
• A Mosaic Genetic Screen for Genes Involved in the Early Steps of Drosophila Oogenesis

  Marlène Jagut, Ludivine Mihaila-Bodart, Anahi Molla-Herman, Marie-Françoise Alin, Jean-Antoine Lepesant, Jean-René Huynh

  G3: Genes, Genomes, Genetics March 2013 3: 409-425; https://doi.org/10.1534/g3.112.004747
• Imputation of Unordered Markers and the Impact on Genomic Selection Accuracy

  Jessica E. Rutkoski, Jesse Poland, Jean-Luc Jannink, Mark E. Sorrells

  G3: Genes, Genomes, Genetics March 2013 3: 427-439; https://doi.org/10.1534/g3.112.005363
• The Genetic Architecture of Degenerin/Epithelial Sodium Channels in Drosophila

  Kathleen M. Zelle, Beika Lu, Sarah C. Pyfrom, Yehuda Ben-Shahar

  G3: Genes, Genomes, Genetics March 2013 3: 441-450; https://doi.org/10.1534/g3.112.005272
• Mature Microsatellites: Mechanisms Underlying Dinucleotide Microsatellite Mutational Biases in Human Cells

  Beverly A. Baptiste, Guruprasad Ananda, Noelle Strubczewski, Andrew Lutzkanin, Su Jen Khoo, Abhinaya Srikanth, Nari Kim, Kateryna D. Makova, Maria M. Krasilnikova, Kristin A. Eckert

  G3: Genes, Genomes, Genetics March 2013 3: 451-463; https://doi.org/10.1534/g3.112.005173
• Unequal Recombination and Evolution of the Mating-Type (MAT) Loci in the Pathogenic Fungus Grosmannia clavigera and Relatives

  Clement K.-M. Tsui, Scott DiGuistini, Ye Wang, Nicolas Feau, Braham Dhillon, Jörg Bohlmann, Richard C. Hamelin

  G3: Genes, Genomes, Genetics March 2013 3: 465-480; https://doi.org/10.1534/g3.112.004986
• Resource Allocation for Maximizing Prediction Accuracy and Genetic Gain of Genomic Selection in Plant Breeding: A Simulation Experiment

  Aaron J. Lorenz

  G3: Genes, Genomes, Genetics March 2013 3: 481-491; https://doi.org/10.1534/g3.112.004911
• Genetic Interactions of Arabidopsis thaliana Damaged DNA Binding Protein 1B (DDB1B) With DDB1A, DET1, and COP1

  Ashwin L. Ganpudi, Dana F. Schroeder

  G3: Genes, Genomes, Genetics March 2013 3: 493-503; https://doi.org/10.1534/g3.112.005249
• A Genomic Survey of Reb Homologs Suggests Widespread Occurrence of R-Bodies in Proteobacteria

  Kasie Raymann, Louis-Marie Bobay, Thomas G. Doak, Michael Lynch, Simonetta Gribaldo

  G3: Genes, Genomes, Genetics March 2013 3: 505-516; https://doi.org/10.1534/g3.112.005231
• PolyCat: A Resource for Genome Categorization of Sequencing Reads From Allopolyploid Organisms

  Justin T. Page, Alan R. Gingle, Joshua A. Udall

  G3: Genes, Genomes, Genetics March 2013 3: 517-525; https://doi.org/10.1534/g3.112.005298
• Calcineurin Governs Thermotolerance and Virulence of Cryptococcus gattii

  Ying-Lien Chen, Virginia N. Lehman, Yonathan Lewit, Anna F. Averette, Joseph Heitman

  G3: Genes, Genomes, Genetics March 2013 3: 527-539; https://doi.org/10.1534/g3.112.004242
• Distinct 3-O-Sulfated Heparan Sulfate Modification Patterns Are Required for kal-1−Dependent Neurite Branching in a Context-Dependent Manner in Caenorhabditis elegans

  Eillen Tecle, Carlos A. Diaz-Balzac, Hannes E. Bülow

  G3: Genes, Genomes, Genetics March 2013 3: 541-552; https://doi.org/10.1534/g3.112.005199
• Actin Dosage Lethality Screening in Yeast Mediated by Selective Ploidy Ablation Reveals Links to Urmylation/Wobble Codon Recognition and Chromosome Stability

  Brian Haarer, Lei Mi-Mi, Jessica Cho, Matthew Cortese, Susan Viggiano, Daniel Burke, David Amberg

  G3: Genes, Genomes, Genetics March 2013 3: 553-561; https://doi.org/10.1534/g3.113.005579
• Fine-Mapping and Identification of a Candidate Gene Underlying the d2 Dwarfing Phenotype in Pearl Millet, Cenchrus americanus (L.) Morrone

  Rajiv K. Parvathaneni, Vinod Jakkula, Francis K. Padi, Sebastien Faure, Nethra Nagarajappa, Ana C. Pontaroli, Xiaomei Wu, Jeffrey L. Bennetzen, Katrien M. Devos

  G3: Genes, Genomes, Genetics March 2013 3: 563-572; https://doi.org/10.1534/g3.113.005587
• Cell-Cycle Perturbations Suppress the Slow-Growth Defect of spt10Δ Mutants in Saccharomyces cerevisiae

  Jennifer S. Chang, Fred Winston

  G3: Genes, Genomes, Genetics March 2013 3: 573-583; https://doi.org/10.1534/g3.112.005389